EG358256

Overview
NameEG358256
Unique NameEG358256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.593e-32
Identity = 61/70 (87.14%), Postives = 69/70 (98.57%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TVDE+R+AQ+AEGPAT++AIGTATPPNCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.999e-32
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+++R+AQRAEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEH  +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.835e-32
Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+E RKAQRAEGPAT+MAIGTATP NCVDQSTYPDYYFRITNSEH TDLKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATVMAIGTATPTNCVDQSTYPDYYFRITNSEHKTDLKEKFKRMCEKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 7.835e-32
Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+EVR+AQRA+GPATIMAIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMI KRYM
Sbjct:    1 MVTVEEVRRAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.336e-31
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+R+AQRAEGPATI+AIGTATP NCVDQSTYPDYYFRITNSEHMTDLKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.336e-31
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+E+R+AQRAEGPATIMAIGTATP NCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEIRRAQRAEGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.745e-31
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+EVRKAQRAEGPATI+AIGTATP NCVDQSTYPDYYFRITNS+HMTDLK+KF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVDQSTYPDYYFRITNSDHMTDLKQKFQRMCDKSMITKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+R+AQRAEGPATI+AIGTA PPNCVDQSTYPDYYFRITNSEHMT+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 60/70 (85.71%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+++R+AQRAEGPAT+MAIGTATP NCVDQSTYPDYYFRITNSEH TDLKEKFKRMC+KSMI+KRYM
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPENCVDQSTYPDYYFRITNSEHRTDLKEKFKRMCEKSMIRKRYM 70
[Close]
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M+TV+EVR+AQRAEGPAT++AIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKS IK+RYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVLAIGTATPANCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSNIKRRYM 70
The following BLAST results are available for this feature:
BLAST of EG358256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSB_PEA4.593e-3287.14Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHS1_CAMSI5.999e-3287.14Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSA_PETHY7.835e-3290.00Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS2_SOLLC7.835e-3290.00Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_PHAVU1.336e-3188.57Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHSJ_PETHY1.336e-3188.57Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHSD_IPONI1.745e-3188.57Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHSY_PUELO2.977e-3187.14Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSY_PERFR2.977e-3185.71Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHSY_ANTMA2.977e-3187.14Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]

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Properties
Property NameValue
Genbank description1e8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358256 ID=EG358256; Name=EG358256; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAATTTATAAAGTATCAACAAGAGCTAGACAGGTCTCCG
GGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCGAAGGTCCGGCCACGATCATGGCCATTGGAACG
GCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACGAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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