EG358256

Overview
NameEG358256
Unique NameEG358256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.459e-19
Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 1
Query:   76 TMLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            T+LT    R+ +R EG A I+AIGTA P N VDQ+TYPD+YFRITNSEH+ + KEKF+R+C+KS I+KR++
Sbjct:    3 TILTNTWTRREKRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 73          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.606e-19
Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 1
Query:   76 TMLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            T+LT    R+ +R +G A I+AIGTA P N VDQ+TYPD+YFRITNSEH+ + KEKF+R+C+KS I+KR++
Sbjct:    6 TILTDTWTRREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHL 76          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.606e-19
Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1
Query:   76 TMLTVDEVRKAQR--AEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            TMLT    R+A+R   EG A I+AIGTATP N VDQ+TYPD+YFRITNS+H+ + KEKF+R+C+KS I+KR+M
Sbjct:    6 TMLTDTWSRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHM 78          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.890e-18
Identity = 40/61 (65.57%), Postives = 53/61 (86.89%), Query Frame = 1
Query:  106 AQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            A+R EG A ++AIGTATP N VDQ+TYPD+YFRITNSEH+ + KEKF+R+C+KS I+KR++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.890e-18
Identity = 40/61 (65.57%), Postives = 53/61 (86.89%), Query Frame = 1
Query:  106 AQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            A+R EG A ++AIGTATP N VDQ+TYPD+YFRITNSEH+ + KEKF+R+C+KS I+KR++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.930e-18
Identity = 44/73 (60.27%), Postives = 59/73 (80.82%), Query Frame = 1
Query:   76 TMLTVDEVRKAQR--AEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            T+LT    R+A+R   EG A I+AIGTATP N VDQ+TYPD+YFRITNS+H+ + KEKF+R+C+KS I+KR++
Sbjct:    6 TVLTDTWGRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHL 78          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.439e-18
Identity = 39/62 (62.90%), Postives = 53/62 (85.48%), Query Frame = 1
Query:  103 KAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +A++ EG A I AIGTATP N VDQ+TYPD+YFRITNS+H+ + KEKF+R+C+KS I+KR++
Sbjct:   15 RAKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHL 76          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.071e-16
Identity = 38/61 (62.30%), Postives = 51/61 (83.61%), Query Frame = 1
Query:  106 AQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            A+R EG A ++AIGTATP N VDQ+TYPD+YFRITNSE + + KEKF+R+C+KS I+ R++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHL 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.027e-16
Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 1
Query:  100 RKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            RK +RA GP +++AIG+A PPN   QS +PD+YF IT S HM ++K KF RMC KS IKKR M
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRM 77          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 1
Query:  127 ATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRY 285
            A+++AIGT  P + + Q  YPD+YFR TNSEHMT+LKEKFKR+C KS I+KR+
Sbjct:   20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRH 72          
The following BLAST results are available for this feature:
BLAST of EG358256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSA_IPONI4.459e-1960.56Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
CHSC_IPOPU7.606e-1959.15Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSB_IPOTF7.606e-1963.01Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSA_IPOTF2.890e-1865.57Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]
CHSA_IPOCO2.890e-1865.57Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPOTR4.930e-1860.27Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSB_IPONI6.439e-1862.90Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPOTR2.071e-1662.30Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
VPS_PSINU6.027e-1658.73Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
TBSYN_HYPAN1.641e-1362.26Trihydroxybenzophenone synthase OS=Hypericum andro... [more]

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Properties
Property NameValue
Genbank description1e8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358256 ID=EG358256; Name=EG358256; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAATTTATAAAGTATCAACAAGAGCTAGACAGGTCTCCG
GGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCGAAGGTCCGGCCACGATCATGGCCATTGGAACG
GCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACGAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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