EG358256

Overview
NameEG358256
Unique NameEG358256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS2_SORBI (Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.864e-28
Identity = 56/70 (80.00%), Postives = 64/70 (91.43%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M  ++  RKAQRA+GPATI+AIGTATPPN VDQS+YPDYYF+ITNSEHMT+LKEKF+RMCDKS IKKRYM
Sbjct:    6 MKDLEAFRKAQRADGPATILAIGTATPPNAVDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKRYM 75          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.964e-28
Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVRKAQRAEGPAT++AIGTATP NCV Q+ YPDYYF+IT S+HM DLKEKFKRMCDKS I+KRYM
Sbjct:    5 MTVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.964e-28
Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVRKAQRAEGPAT++AIGTATP NCV Q+ YPDYYF+IT S+HM DLKEKFKRMCDKS I+KRYM
Sbjct:    5 MTVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.964e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+R+AQRAEGPATIMAIGTA P NCV+QSTYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVAEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.171e-27
Identity = 53/70 (75.71%), Postives = 65/70 (92.86%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M +++E+R+AQRA+GPATI+AIGTATPPN + Q+ YPDYYFR+T SEHMT+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MASIEEIRQAQRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.529e-27
Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVR+AQRAEGPAT++AIGTATP NCV Q+ YPDYYFRIT SEHM +LKEKFKRMCDKS I+KRYM
Sbjct:    5 VTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.529e-27
Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+EVR+AQRAEGPAT++AIGTATP NCV Q+ YPDYYFRIT SEHM +LKEKFKRMCDKS I+KRYM
Sbjct:    5 VTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.529e-27
Identity = 54/70 (77.14%), Postives = 64/70 (91.43%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+R AQRAEGPAT +AIGTA P NCV+QSTYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRNAQRAEGPATTLAIGTANPTNCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS2_SORBI5.255e-2881.16Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=... [more]
CHS1_SORBI5.255e-2881.16Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHSY_PINSY6.864e-2880.00Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]
CHS2_SECCE8.964e-2879.71Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS1_SECCE8.964e-2879.71Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHS1_MEDSA8.964e-2878.57Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
CHSY_DIAMO1.171e-2775.71Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHSY_ORYSJ1.529e-2779.71Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI1.529e-2779.71Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHS5_MEDSA1.529e-2777.14Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2... [more]

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Properties
Property NameValue
Genbank description1e8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358256 ID=EG358256; Name=EG358256; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAATTTATAAAGTATCAACAAGAGCTAGACAGGTCTCCG
GGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCGAAGGTCCGGCCACGATCATGGCCATTGGAACG
GCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACGAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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