EG358256

Overview
NameEG358256
Unique NameEG358256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.589e-27
Identity = 54/70 (77.14%), Postives = 64/70 (91.43%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+RKAQRAEGPATI+AIGTA PPN V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPPNRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.691e-26
Identity = 54/70 (77.14%), Postives = 64/70 (91.43%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+RKAQRAEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKTELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.884e-26
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+ +RKAQRA+GPA ++AIGTATP N V Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKSMI+KRYM
Sbjct:    4 VTVEAIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYM 72          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.884e-26
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 1
Query:   97 VRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +R AQRAEGPATI+AIGTATP NCV Q+ YPDYYFRIT SEHM DLKEKFKRMCDKSMI+KRYM
Sbjct:   10 IRDAQRAEGPATILAIGTATPANCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYM 73          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 52/70 (74.29%), Postives = 65/70 (92.86%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V+EVR+AQR EGPATI+AIGTATP NCVDQ+TYPDY+FR+TNS+H T+LKEKFKRM ++SMIKK Y+
Sbjct:    1 MVSVEEVRRAQRREGPATILAIGTATPLNCVDQTTYPDYFFRVTNSDHKTELKEKFKRMFERSMIKKSYL 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS4_TRISU (Chalcone synthase 4 (Fragment) OS=Trifolium subterraneum GN=CHS4 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+RKAQRAEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS2_TRISU (Chalcone synthase 2 OS=Trifolium subterraneum GN=CHS2 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+RKAQRAEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+RKAQRAEGPATI+AIGTA P N V+QSTYPD+YF+ITNSEH  +LK+KF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPSNRVEQSTYPDFYFKITNSEHKVELKQKFQRMCDKSMIKSRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.919e-26
Identity = 49/70 (70.00%), Postives = 63/70 (90.00%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V  +RK QRAEGPAT++AIGTA PPNC+DQSTY DYYFR+TNSEHMTDLK+KF+R+C+++ IK R+M
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCIDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.919e-26
Identity = 51/67 (76.12%), Postives = 62/67 (92.54%), Query Frame = 1
Query:   88 VDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            ++E+R+AQRAEGPA ++AIGT+TPPN + Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
The following BLAST results are available for this feature:
BLAST of EG358256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS1_TRISU7.589e-2777.14Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS6_TRISU1.691e-2677.14Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]
CHS1_RUTGR2.884e-2676.81Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHS1_GERHY2.884e-2684.38Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHSF_PETHY3.766e-2674.29Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
CHS4_TRISU3.766e-2675.71Chalcone synthase 4 (Fragment) OS=Trifolium subter... [more]
CHS2_TRISU3.766e-2675.71Chalcone synthase 2 OS=Trifolium subterraneum GN=C... [more]
CHS1_CICAR3.766e-2675.71Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
THS3_ARAHY4.919e-2670.00Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
CHS8_BROFI4.919e-2676.12Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]

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Properties
Property NameValue
Genbank description1e8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358256 ID=EG358256; Name=EG358256; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAATTTATAAAGTATCAACAAGAGCTAGACAGGTCTCCG
GGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCGAAGGTCCGGCCACGATCATGGCCATTGGAACG
GCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACGAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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