EG358256

Overview
NameEG358256
Unique NameEG358256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.919e-26
Identity = 51/67 (76.12%), Postives = 62/67 (92.54%), Query Frame = 1
Query:   88 VDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            ++E+R+AQRAEGPA ++AIGT+TPPN + Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.919e-26
Identity = 51/67 (76.12%), Postives = 62/67 (92.54%), Query Frame = 1
Query:   88 VDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            ++E+R+AQRAEGPA ++AIGT+TPPN + Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.919e-26
Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = 1
Query:   88 VDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            ++E+RK QRA+GPA I+AIGTATP NCV Q+ YPDYYFRITNSEHM+DLK KFKRMC+KSMI+KRYM
Sbjct:    8 IEEIRKRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRMCEKSMIRKRYM 74          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.424e-26
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 1
Query:   88 VDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            ++E+R  QRA+GPA I+AIGTATP NCV Q+ YPDYYFRITNSEHMTDLK KFKRMC+KSMI+KRYM
Sbjct:    9 IEEIRNRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEKSMIRKRYM 75          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.424e-26
Identity = 52/70 (74.29%), Postives = 61/70 (87.14%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M TV+E+RKAQRAEGPAT++AIGTA P NCVDQS YPD+ FRIT S+H T+LKEKFK MC+ SMIKKRY+
Sbjct:    1 MATVEEIRKAQRAEGPATVLAIGTANPSNCVDQSAYPDFLFRITTSDHKTELKEKFKHMCEGSMIKKRYL 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: VPS_HUMLU (Phloroisovalerophenone synthase OS=Humulus lupulus GN=VPS PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.390e-26
Identity = 50/69 (72.46%), Postives = 63/69 (91.30%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +TV+++RKAQRAEGPATI+AIGTA P NC +Q+ +PDYYFR+T SEHMTDLK+KF+RMC+KS IKKRY+
Sbjct:    4 VTVEQIRKAQRAEGPATILAIGTAVPANCFNQADFPDYYFRVTKSEHMTDLKKKFQRMCEKSTIKKRYL 72          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 49/70 (70.00%), Postives = 62/70 (88.57%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V  +RK QRAEGPAT++AIGTA PPNCVDQSTY DYYFR+TN EHMTDLK+KF+R+C+++ IK R+M
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCVDQSTYADYYFRVTNGEHMTDLKKKFQRICERTQIKNRHM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1
Query:   82 LTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            + +  +R+AQR +GPATI+AIGTATP NCV Q+ YPDYYFRIT SEHM DLKEKFKRMCDKSMI+KRYM
Sbjct:    5 IDIAAIREAQRRQGPATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYM 73          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHS3_TRISU (Chalcone synthase 3 OS=Trifolium subterraneum GN=CHS3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 52/70 (74.29%), Postives = 63/70 (90.00%), Query Frame = 1
Query:   79 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M++V E+R+AQRAEGPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358256 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.431e-25
Identity = 52/68 (76.47%), Postives = 62/68 (91.18%), Query Frame = 1
Query:   85 TVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            +++E+RKAQRA+GPA I+ IGTA PPN V Q+ YPDYYFRITNS+HMTDLKEKFKRMCDKSMI+KR+M
Sbjct:    4 SLEEIRKAQRADGPAGILGIGTANPPNHVLQAEYPDYYFRITNSDHMTDLKEKFKRMCDKSMIRKRHM 71          
The following BLAST results are available for this feature:
BLAST of EG358256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS4_BROFI4.919e-2676.12Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI4.919e-2676.12Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHS2_DAUCA4.919e-2677.61Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHSY_PETCR6.424e-2677.61Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHSG_PETHY6.424e-2674.29Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]
VPS_HUMLU8.390e-2672.46Phloroisovalerophenone synthase OS=Humulus lupulus... [more]
THS1_ARAHY1.096e-2570.00Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
CHSY_CALCH1.096e-2575.36Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS3_TRISU1.096e-2574.29Chalcone synthase 3 OS=Trifolium subterraneum GN=C... [more]
CHSY_ARAAL1.431e-2576.47Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]

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Properties
Property NameValue
Genbank description1e8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358256 ID=EG358256; Name=EG358256; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAATTTATAAAGTATCAACAAGAGCTAGACAGGTCTCCG
GGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCGAAGGTCCGGCCACGATCATGGCCATTGGAACG
GCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACGAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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