EG358255

Overview
NameEG358255
Unique NameEG358255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 60/70 (85.71%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+++R+AQRA+GPAT+MAIGTATP NCVDQSTYPDYYFRITNSEH TDLKEKFKRMC+KSMI+KRYM
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPENCVDQSTYPDYYFRITNSEHRTDLKEKFKRMCEKSMIRKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+EVR+AQRA+GPAT++AIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKS IK+RYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVLAIGTATPANCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSNIKRRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+E RKAQRA+GPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+E RKAQRA+GPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+E RKAQRA+GPATI+AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.663e-31
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+EVRKAQRA+GPAT+MAIGTA PPNCVDQ+TYPDYYFRITNSEH  +LKEKF+RMCDKS IKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.131e-30
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV++V +AQRA+GPAT++AIGTATPPNCVDQSTYPDYYFRITNSEH  +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEDVWRAQRARGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSD_PETHY (Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+EVR AQRA+GPAT++AIGTATP NCVDQSTYPDYYFRIT+SEH T+LKEKFKR+CDKSMIKKRYM
Sbjct:    1 MVTVEEVRNAQRAEGPATVLAIGTATPSNCVDQSTYPDYYFRITDSEHKTELKEKFKRICDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+EVRKAQRA+GPATI+AIGTATP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.520e-30
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV V+E+R AQRAQGPAT++AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVNVEEIRNAQRAQGPATVLAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMIKKRYM 70
The following BLAST results are available for this feature:
BLAST of EG358255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSY_PERFR2.977e-3185.71Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHSY_ANTMA2.977e-3187.14Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHSB_SOLTU2.977e-3188.57Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHSA_SOLTU2.977e-3188.57Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS1_SOLLC2.977e-3188.57Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_HYPAN8.663e-3185.71Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHS3_CAMSI1.131e-3085.71Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHSD_PETHY1.930e-3085.71Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=... [more]
CHS6_IPOBA1.930e-3087.14Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHSY_CATRO2.520e-3084.29Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]

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Properties
Property NameValue
Genbank description10b4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358255 ID=EG358255; Name=EG358255; organism=Citrus sinensis; type=EST; length=289bp
ACGCGGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCC
GGGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTT
CGCAAGGCTCAACGTGCCCAAGGTCCGGCCACGATCATGGCCATTGGAAC
GGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATT
TTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAG
CGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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