EG358255

Overview
NameEG358255
Unique NameEG358255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.108e-29
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEH+TDLKEKFKRMCDKSMI+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYM 74          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.059e-28
Identity = 57/70 (81.43%), Postives = 66/70 (94.29%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTATP NCV+QSTYPD+YF+ITNSEH T LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTATPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.059e-28
Identity = 56/70 (80.00%), Postives = 66/70 (94.29%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.059e-28
Identity = 56/70 (80.00%), Postives = 66/70 (94.29%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.383e-28
Identity = 57/70 (81.43%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPAT++AIGTATP NCV Q+ YPDYYFRITNSEHMT+LKEKFKRMC+KSMI KRYM
Sbjct:    1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMINKRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.383e-28
Identity = 57/70 (81.43%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV E+RKAQRA+GPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVTVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.806e-28
Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            M +V+E+RKAQRA GPAT++AIGTATP NC+ Q+ YPDYYFRIT S+HMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMCDKSMIKKRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_MAIZE (Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.806e-28
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTVDEVRK QRA GPAT++AIGTATP NCV Q+ YPDYYFRIT S+H+TDLKEKFKRMCDKSMI+KRYM
Sbjct:    6 VTVDEVRKGQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSDHLTDLKEKFKRMCDKSMIRKRYM 74          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.359e-28
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.359e-28
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
The following BLAST results are available for this feature:
BLAST of EG358255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS2_MAIZE8.108e-2984.06Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHS6_PEA1.059e-2881.43Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ... [more]
CHS4_MEDSA1.059e-2880.00Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]
CHS2_MEDSA1.059e-2880.00Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=... [more]
CHSY_VITVI1.383e-2881.43Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHS2_PEA1.383e-2881.43Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHSY_BETVE1.806e-2878.57Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS1_MAIZE1.806e-2882.61Chalcone synthase WHP1 OS=Zea mays GN=WHP1 PE=3 SV... [more]
CHS6_SORBI2.359e-2882.61Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=... [more]
CHS5_SORBI2.359e-2882.61Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]

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Properties
Property NameValue
Genbank description10b4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358255 ID=EG358255; Name=EG358255; organism=Citrus sinensis; type=EST; length=289bp
ACGCGGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCC
GGGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTT
CGCAAGGCTCAACGTGCCCAAGGTCCGGCCACGATCATGGCCATTGGAAC
GGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATT
TTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAG
CGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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