EG358255

Overview
NameEG358255
Unique NameEG358255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS4_SORBI (Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.359e-28
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_SORBI (Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.359e-28
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.359e-28
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+EVRKAQRA GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.081e-28
Identity = 57/70 (81.43%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+EVRKAQRA+GPATI+AIGTATPPN VDQSTYPD+YFR+TNSEH  +LK KF+RMCD S IKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPPNYVDQSTYPDFYFRVTNSEHKKELKAKFQRMCDNSQIKKRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.081e-28
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            M  ++  RKAQRA GPATI+AIGTATPPN VDQSTYPDYYF+ITNSEHMT+LKEKF+RMCDKS IKKRYM
Sbjct:    6 MADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFQRMCDKSAIKKRYM 75          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_PINST (Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.024e-28
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            M  ++  RKAQRA GPATI+AIGTATPPN VDQSTYPDYYF+ITNSEHMT+LKEKF+RMCDKS IKKRYM
Sbjct:    6 MADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFRRMCDKSGIKKRYM 75          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.024e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P NCV+QSTYPD+YFRITNSEH T+LK+KF+RMCDKSMI +RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.024e-28
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+E+RKAQRA GPAT++AIGTATP N V Q+ YPDYYFRIT SEHMTDLKEKFKRMCDKSMI+KRYM
Sbjct:    4 VTVEEIRKAQRADGPATVLAIGTATPANYVTQADYPDYYFRITKSEHMTDLKEKFKRMCDKSMIRKRYM 72          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.024e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P NCV+QSTYPD+YFRITNSEH T+LK+KF+RMCDKSMI +RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+R+AQRA+GPATIMAIGTA P NCV+QSTYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS4_SORBI2.359e-2882.61Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=... [more]
CHS2_SORBI2.359e-2882.61Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=... [more]
CHS1_SORBI2.359e-2882.61Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHSY_HYDMC3.081e-2881.43Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHS7_PICMA3.081e-2881.43Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]
CHSY_PINST4.024e-2881.43Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=... [more]
CHS5_PEA4.024e-2878.57Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS3_RUTGR4.024e-2882.61Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHS3_PEA4.024e-2878.57Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]
CHS9_MEDSA5.255e-2878.57Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]

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Properties
Property NameValue
Genbank description10b4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358255 ID=EG358255; Name=EG358255; organism=Citrus sinensis; type=EST; length=289bp
ACGCGGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCC
GGGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTT
CGCAAGGCTCAACGTGCCCAAGGTCCGGCCACGATCATGGCCATTGGAAC
GGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATT
TTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAG
CGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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