EG358255

Overview
NameEG358255
Unique NameEG358255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS8_MEDSA (Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+R AQRA+GPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRTAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.255e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+R+AQRA+GPATIMAIGTA P NCV+QSTYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPSNCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.964e-28
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+R+AQRA+GPATIMAIGTA P NCV+QSTYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVAEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.171e-27
Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            M  ++  RKAQRA GPATI+AIGTATPPN VDQS+YPDYYF+ITNSEHMT+LKEKF+RMCDKS IKKRYM
Sbjct:    6 MKDLEAFRKAQRADGPATILAIGTATPPNAVDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKRYM 75          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.529e-27
Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+EVR+AQRA+GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHM +LKEKFKRMCDKS I+KRYM
Sbjct:    5 VTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.529e-27
Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+EVR+AQRA+GPAT++AIGTATP NCV Q+ YPDYYFRIT SEHM +LKEKFKRMCDKS I+KRYM
Sbjct:    5 VTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.529e-27
Identity = 53/70 (75.71%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            M +++E+R+AQRA GPATI+AIGTATPPN + Q+ YPDYYFR+T SEHMT+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MASIEEIRQAQRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.529e-27
Identity = 54/70 (77.14%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+R AQRA+GPAT +AIGTA P NCV+QSTYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRNAQRAEGPATTLAIGTANPTNCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.529e-27
Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RK QRA+GPATI+AIGTA P NCV+QSTYPD+YF+ITNSEH T LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRKPQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.997e-27
Identity = 54/70 (77.14%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P NCV+QSTYPD+YFRITNSEH  +LK+KF+RMCDKSMI +RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKIELKQKFQRMCDKSMINRRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS8_MEDSA5.255e-2878.57Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=... [more]
CHS3_MEDSA5.255e-2878.57Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS1_MEDSA8.964e-2878.57Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
CHSY_PINSY1.171e-2780.00Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]
CHSY_ORYSJ1.529e-2779.71Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI1.529e-2779.71Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHSY_DIAMO1.529e-2775.71Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHS5_MEDSA1.529e-2777.14Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2... [more]
CHS1_PEA1.529e-2778.57Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHS4_PEA1.997e-2777.14Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 ... [more]

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Properties
Property NameValue
Genbank description10b4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358255 ID=EG358255; Name=EG358255; organism=Citrus sinensis; type=EST; length=289bp
ACGCGGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCC
GGGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTT
CGCAAGGCTCAACGTGCCCAAGGTCCGGCCACGATCATGGCCATTGGAAC
GGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATT
TTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAG
CGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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