EG358255

Overview
NameEG358255
Unique NameEG358255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.608e-27
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            +TV+EVRKAQRA+GPAT++AIGTATP NCV Q+ YPDYYF+IT S+HM DLKEKFKRMCDKS I+KRYM
Sbjct:    5 MTVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.608e-27
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            +TV+EVRKAQRA+GPAT++AIGTATP NCV Q+ YPDYYF+IT S+HM DLKEKFKRMCDKS I+KRYM
Sbjct:    5 MTVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.449e-27
Identity = 55/69 (79.71%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+E+RKAQRA GPA ++AIGTATP N V Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKSMI+KRYM
Sbjct:    4 VTVEEIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYM 72          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.449e-27
Identity = 55/70 (78.57%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            M TV E+R AQRA GPAT++AIGTATP + V+Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.811e-27
Identity = 55/70 (78.57%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+E RKAQRA+GPAT++AIGTATPPNCVDQS Y DYYFRITNSE   +LKEKF+RMC+KSMI  RYM
Sbjct:    1 MVTVNEFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.811e-27
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            ++ V+ +RKAQRA+GPATI+AIGTATP NCV Q+ YPDYYFR+T SEHM DLKEKF+RMCDKSMI+KRYM
Sbjct:    7 VIDVETIRKAQRAEGPATILAIGTATPANCVYQADYPDYYFRVTESEHMVDLKEKFQRMCDKSMIRKRYM 76          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.811e-27
Identity = 55/70 (78.57%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+E RKAQRA+GPAT++AIGTATPPNCVDQS Y DYYFRITNSE   +LKEKF+RMC+KSMI  RYM
Sbjct:    1 MVTVNEFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.589e-27
Identity = 52/70 (74.29%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            M +++E+R+A RA GPATI+AIGTATPPN + Q+ YPDYYFR+T SEHMT+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MASIEEIRQAPRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.589e-27
Identity = 54/70 (77.14%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA PPN V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPPNRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.911e-27
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            +TV+EVR AQRA+GPAT++AIGTATP NCV Q+ YPDYYF+IT S+HM DLKEKFKRMCDKS I+KRYM
Sbjct:    5 MTVEEVRNAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYM 73          
The following BLAST results are available for this feature:
BLAST of EG358255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS2_SECCE2.608e-2778.26Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS1_SECCE2.608e-2778.26Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHS2_RUTGR4.449e-2779.71Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS2_CITSI4.449e-2778.57Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS9_DAUCA5.811e-2778.57Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHS3_GERHY5.811e-2775.71Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]
CHS1_DAUCA5.811e-2778.57Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHSY_DIACA7.589e-2774.29Chalcone synthase OS=Dianthus caryophyllus GN=CHS ... [more]
CHS1_TRISU7.589e-2777.14Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS1_HORVU9.911e-2776.81Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]

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Properties
Property NameValue
Genbank description10b4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358255 ID=EG358255; Name=EG358255; organism=Citrus sinensis; type=EST; length=289bp
ACGCGGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCC
GGGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTT
CGCAAGGCTCAACGTGCCCAAGGTCCGGCCACGATCATGGCCATTGGAAC
GGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATT
TTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAG
CGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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