EG358255

Overview
NameEG358255
Unique NameEG358255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.691e-26
Identity = 53/67 (79.10%), Postives = 62/67 (92.54%), Query Frame = 2
Query:   89 VDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            ++E+R AQRA+GPATI+AIGTATP NCV Q+ YPD+YFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    7 MEEIRNAQRAEGPATILAIGTATPANCVIQADYPDFYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 73          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.691e-26
Identity = 54/70 (77.14%), Postives = 64/70 (91.43%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH T+LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKTELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.208e-26
Identity = 53/67 (79.10%), Postives = 61/67 (91.04%), Query Frame = 2
Query:   89 VDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            ++E+RK QRAQGPA I+AIGTATP NCV Q+ YPDYYFRITNSEHM+DLK KFKRMC+KSMI+KRYM
Sbjct:    8 IEEIRKRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRMCEKSMIRKRYM 74          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.208e-26
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+ +RKAQRA GPA ++AIGTATP N V Q+ YPDYYFRIT SEHMT+LKEKFKRMCDKSMI+KRYM
Sbjct:    4 VTVEAIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYM 72          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.884e-26
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 2
Query:   89 VDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            ++E+R  QRAQGPA I+AIGTATP NCV Q+ YPDYYFRITNSEHMTDLK KFKRMC+KSMI+KRYM
Sbjct:    9 IEEIRNRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEKSMIRKRYM 75          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            + +  +R+AQR QGPATI+AIGTATP NCV Q+ YPDYYFRIT SEHM DLKEKFKRMCDKSMI+KRYM
Sbjct:    5 IDIAAIREAQRRQGPATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYM 73          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 52/70 (74.29%), Postives = 65/70 (92.86%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V+EVR+AQR +GPATI+AIGTATP NCVDQ+TYPDY+FR+TNS+H T+LKEKFKRM ++SMIKK Y+
Sbjct:    1 MVSVEEVRRAQRREGPATILAIGTATPLNCVDQTTYPDYFFRVTNSDHKTELKEKFKRMFERSMIKKSYL 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS4_TRISU (Chalcone synthase 4 (Fragment) OS=Trifolium subterraneum GN=CHS4 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_TRISU (Chalcone synthase 2 OS=Trifolium subterraneum GN=CHS2 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            V +  +R AQRA+GPATI+AIGTATP NCV Q+ YPDYYFRIT SEHM DLKEKFKRMCDKSMI+KRYM
Sbjct:    5 VDMKAIRDAQRAEGPATILAIGTATPANCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYM 73          
The following BLAST results are available for this feature:
BLAST of EG358255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSY_CHRAE1.691e-2679.10Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHS6_TRISU1.691e-2677.14Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]
CHS2_DAUCA2.208e-2679.10Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS1_RUTGR2.208e-2678.26Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHSY_PETCR2.884e-2679.10Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHSY_CALCH3.766e-2676.81Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHSF_PETHY3.766e-2674.29Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
CHS4_TRISU3.766e-2675.71Chalcone synthase 4 (Fragment) OS=Trifolium subter... [more]
CHS2_TRISU3.766e-2675.71Chalcone synthase 2 OS=Trifolium subterraneum GN=C... [more]
CHS1_GERHY3.766e-2678.26Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]

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Properties
Property NameValue
Genbank description10b4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358255 ID=EG358255; Name=EG358255; organism=Citrus sinensis; type=EST; length=289bp
ACGCGGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCC
GGGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTT
CGCAAGGCTCAACGTGCCCAAGGTCCGGCCACGATCATGGCCATTGGAAC
GGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATT
TTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAG
CGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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