EG358255

Overview
NameEG358255
Unique NameEG358255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.766e-26
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+RKAQRA+GPATI+AIGTA P N V+QSTYPD+YF+ITNSEH  +LK+KF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPSNRVEQSTYPDFYFKITNSEHKVELKQKFQRMCDKSMIKSRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.919e-26
Identity = 49/70 (70.00%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V  +RK QRA+GPAT++AIGTA PPNC+DQSTY DYYFR+TNSEHMTDLK+KF+R+C+++ IK R+M
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCIDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: VPS_HUMLU (Phloroisovalerophenone synthase OS=Humulus lupulus GN=VPS PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.390e-26
Identity = 50/69 (72.46%), Postives = 63/69 (91.30%), Query Frame = 2
Query:   83 VTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            VTV+++RKAQRA+GPATI+AIGTA P NC +Q+ +PDYYFR+T SEHMTDLK+KF+RMC+KS IKKRY+
Sbjct:    4 VTVEQIRKAQRAEGPATILAIGTAVPANCFNQADFPDYYFRVTKSEHMTDLKKKFQRMCEKSTIKKRYL 72          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 49/70 (70.00%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V  +RK QRA+GPAT++AIGTA PPNCVDQSTY DYYFR+TN EHMTDLK+KF+R+C+++ IK R+M
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCVDQSTYADYYFRVTNGEHMTDLKKKFQRICERTQIKNRHM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            M TV+E+RKAQRA+GPAT++AIGTA P NCVDQS YPD+ FRIT S+H T+LKEKFK MC+ SMIKKRY+
Sbjct:    1 MATVEEIRKAQRAEGPATVLAIGTANPSNCVDQSAYPDFLFRITTSDHKTELKEKFKHMCEGSMIKKRYL 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 50/67 (74.63%), Postives = 62/67 (92.54%), Query Frame = 2
Query:   89 VDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            ++E+R+AQRA+GPA ++AIGT+TPPN + Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 50/67 (74.63%), Postives = 62/67 (92.54%), Query Frame = 2
Query:   89 VDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            ++E+R+AQRA+GPA ++AIGT+TPPN + Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS3_TRISU (Chalcone synthase 3 OS=Trifolium subterraneum GN=CHS3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 52/70 (74.29%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+R+AQRA+GPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.096e-25
Identity = 50/67 (74.63%), Postives = 62/67 (92.54%), Query Frame = 2
Query:   89 VDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            ++E+R+AQRA+GPA ++AIGT+TPPN + Q+ YPDYYFRIT SEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS5_TRISU (Chalcone synthase 5 OS=Trifolium subterraneum GN=CHS5 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.869e-25
Identity = 52/70 (74.29%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+R+AQRA+GPATI+AIGTA P N V+Q+TYPD+YF+ITNSEH  +LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS1_CICAR3.766e-2675.71Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
THS3_ARAHY4.919e-2670.00Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
VPS_HUMLU8.390e-2672.46Phloroisovalerophenone synthase OS=Humulus lupulus... [more]
THS1_ARAHY1.096e-2570.00Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
CHSG_PETHY1.096e-2572.86Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]
CHS8_BROFI1.096e-2574.63Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI1.096e-2574.63Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_TRISU1.096e-2574.29Chalcone synthase 3 OS=Trifolium subterraneum GN=C... [more]
CHS3_BROFI1.096e-2574.63Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHS5_TRISU1.869e-2574.29Chalcone synthase 5 OS=Trifolium subterraneum GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank description10b4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358255 ID=EG358255; Name=EG358255; organism=Citrus sinensis; type=EST; length=289bp
ACGCGGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCC
GGGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTT
CGCAAGGCTCAACGTGCCCAAGGTCCGGCCACGATCATGGCCATTGGAAC
GGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATT
TTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAG
CGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
back to top