DY257360

Overview
NameDY257360
Unique NameDY257360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1113
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257360 vs. ExPASy Swiss-Prot
Match: MON1_YARLI (Vacuolar fusion protein MON1 OS=Yarrowia lipolytica GN=MON1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.813e-15
Identity = 55/233 (23.61%), Postives = 97/233 (41.63%), Query Frame = 3
Query:    3 ESFSPICLPRYNPTAFLYAYVHYFDADTYLMLLTTSSDAFYHLKDCRIRIEQVLLRSNVLSEVQRSMLEGGMRVEDLPVDPLPRSSMPHRLSQQRILTQSPEIFSESIVGIGGPTGLWHFIYRSIYLDQYVSSDFSPPISSPQQQKRLYRAYQKLYC-----SMHGKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKAVAIKTCNRVCQWVKDVENEIFLQGASPF 686
            E + PICLP++N T FLYAY+H+F   + L+ ++   +AF+ L++ + +I   +    ++  ++R+   G  +  D+ V P+ R                                  HF+Y+S    QYV   +      P  Q+ L   Y +L+      S  G   G       R+ + +   W+T  FELY    P   +A    + + + +WV      +F+ G + F
Sbjct:  347 EHWVPICLPKFNSTGFLYAYIHFFSKSSALIQISADKNAFFELREAKQQILSQMEDKGLIKALERAEERGRFKPVDVAV-PMVR----------------------------------HFLYKSRAHVQYVMPSYETHYYEPHMQRGLLTFYHQLHAQVNSDSSRGSNNGWRFMHLVRN-SCIGFAWITPSFELYCVSGPNVSRATLAASIHSIAKWVSQHRERLFVIGGAVF 543          
BLAST of DY257360 vs. ExPASy Swiss-Prot
Match: MON1_NEUCR (Vacuolar fusion protein mon-1 OS=Neurospora crassa GN=mon-1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.377e-13
Identity = 67/284 (23.59%), Postives = 108/284 (38.03%), Query Frame = 3
Query:    3 ESFSPICLPRYNPTAFLYAYVHYFDA--------------------------------DTYLMLLTTSSDAFYHLKDCRIRIEQVLLRSNVLSEVQRSMLEGGMRVED-LPVDPLPRSSMPHRLSQQRILTQSPEIFSESIVGIGGPTG-LWHFIYRSIYLDQYVSSDFSP---------PISSPQQ-------------QKRLYRAYQKLYCSMHGKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKAVAIKTCNRVCQWVKDVENEIFLQGASPF 686
            E++ P+CLP +N   +LY YV +FD+                                +  ++L++   ++F+ LK  R ++   L ++  L+ +Q +  +G  R+E  L   PL + +                       G G   G L HF+Y+S    Q+  S  SP         P SSP +             ++RL   Y  L+ S+H K     K      E+   L W+T  FE Y    P     +  +  N+V QW K  E  +F+ G   F
Sbjct:  419 ENWVPLCLPAFNNRGYLYMYVSFFDSVETAEENNSNNTNNPEQPPQPPPPKPVTSPDEEIAIILISADKESFFELKSMRDKLALQLAKNGSLALIQSAARQGRPRIETILNTKPLSKEA-----------------------GQGQGQGQLSHFLYKSRANVQFCQSSLSPAFETSSPPLPSSSPSENGSSQKTTEKLVSRRRLMTLYHHLHASIHAKH-SHLKVLHLVSEDAASLAWITPVFEFYCVAGPNMSSGIMTQCANKVVQWAKREEERLFIIGGGVF 678          
BLAST of DY257360 vs. ExPASy Swiss-Prot
Match: MON1_ASPCL (Vacuolar fusion protein mon1 OS=Aspergillus clavatus GN=mon1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.088e-12
Identity = 54/244 (22.13%), Postives = 101/244 (41.39%), Query Frame = 3
Query:    3 ESFSPICLPRYNPTAFLYAYVHYFDA----------------DTYLMLLTTSSDAFYHLKDCRIRIEQVLLRSNVLSEVQRSMLEGGMRVEDLPVDPLPRSSMPHRLSQQRILTQSPEIFSESIVGIGGPTGLWHFIYRSIYLDQYVSSDFSPPISSPQQQKRLYRAYQKLYCSMHGKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKAVAIKTCNRVCQWVKDVENEIFLQGASPF 686
            E++ P+CLP +N + +LY YV + D                    ++L++T  ++F+ L+  R    + + ++  +  ++ ++  G     D+                                 + G T L HF+Y+S    Q+  S + P  SS  + +RL   Y  L+ S+H K     K      ++     WVT  FELY    P A++    ++ +++ QWV+  E  +F+ G + F
Sbjct:  422 ENWIPVCLPGFNSSGYLYMYVSFLDLREDSGSTANETATKEESVAIILISTKKESFFELQGMRNAFVEQMDKNESIKIIKEAIKRGRPTTTDI---------------------------------VPG-TVLHHFLYKSRANVQFTMSAYGPESSSTFRLRRLMSTYNDLHSSVHAKHAHV-KVHHCVSQSTSSFAWVTPRFELYCVASPNANRNALAQSASKIVQWVQQEEERLFIIGGAVF 630          
BLAST of DY257360 vs. ExPASy Swiss-Prot
Match: MON1_CHAGB (Vacuolar fusion protein MON1 OS=Chaetomium globosum GN=MON1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.855e-12
Identity = 64/265 (24.15%), Postives = 107/265 (40.38%), Query Frame = 3
Query:    3 ESFSPICLPRYNPTAFLYAYVHYFDADT--------------------------------YLMLLTTSSDAFYHLKDCRIRIEQVLLRSNVLSEVQRSMLEGGMRVEDLPVDPLPRSSMPHRLSQQRILTQSPEIFSESIVGIGGPT---GLWHFIYRSIYLDQYVSSDFSPPISSPQQ--QKRLYRAYQKLYCSMHGKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKAVAIKTCNRVCQWVKDVENEIFLQGASPF 686
            ES+ P+CLP +N   +LY YV +FD +                                  L+L++   ++FY LK+ R ++   L ++  LS ++ +  E   +++ +     P + + H L + R   Q    F  S +    P    G       ++     V+S  +  +   +   ++RL   Y +L+ SMH K     K      E+   L W+T  FE Y    P A +A   +  NRV QW K  E  +F+ G   F
Sbjct:  401 ESWIPLCLPAFNNRGYLYMYVSFFDGNADPAFSAESTAEDTPESSTDTNTTNTTEKEDEIALILISPDKESFYDLKEMRDKLAAQLTKTGHLSLIRSAARERRPQIQTIA----PGAQIAHFLYKSRANVQ----FCMSALEPANPNPTPGTSSTTPTTVATTATVASTSTSTLEPEKMLTRRRLMTLYHELHASMHAKH-AHLKVLHAVSEDAASLAWITPVFEFYCVAGPNAPRAAMAQGANRVIQWAKREEERLFIIGGGVF 656          
The following BLAST results are available for this feature:
BLAST of DY257360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
MON1_YARLI6.813e-1523.61Vacuolar fusion protein MON1 OS=Yarrowia lipolytic... [more]
MON1_NEUCR6.377e-1323.59Vacuolar fusion protein mon-1 OS=Neurospora crassa... [more]
MON1_ASPCL1.088e-1222.13Vacuolar fusion protein mon1 OS=Aspergillus clavat... [more]
MON1_CHAGB1.855e-1224.15Vacuolar fusion protein MON1 OS=Chaetomium globosu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2AF11FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257360 ID=DY257360; Name=DY257360; organism=Citrus sinensis; type=EST; length=1113bp
CTGAATCTTTTTCACCAATTTGCCTGCCAAGATATAATCCCACGGCATTT
TTGTATGCTTATGTCCATTATTTTGATGCTGACACATACCTGATGTTGCT
TACTACTAGCTCGGATGCCTTTTATCATCTTAAAGATTGCAGGATTCGTA
TAGAACAGGTCCTTTTGAGGTCAAATGTTCTTAGTGAAGTTCAGAGATCC
ATGCTAGAAGGGGGAATGCGTGTTGAGGATTTGCCTGTTGATCCATTGCC
TCGTTCATCTATGCCTCATCGTTTGAGCCAGCAGAGGATTTTAACACAGT
CTCCTGAAATATTCAGTGAATCAATTGTTGGCATTGGTGGTCCTACCGGA
CTGTGGCATTTCATCTATCGTAGTATATATCTGGATCAATATGTGTCTTC
TGATTTCTCACCTCCAATTAGCAGTCCTCAACAGCAGAAAAGATTGTATA
GAGCATACCAGAAACTTTACTGTTCCATGCATGGTAAAGGAATTGGTCCC
CACAAGACTCAATTTAGAAGGGATGAAAATTATGTTCTACTCTGCTGGGT
CACACAGGATTTTGAACTTTATGCAGCATTTGATCCGCTTGCAGATAAGG
CAGTGGCAATAAAGACTTGCAACCGGGTTTGTCAGTGGGTTAAAGATGTG
GAAAATGAAATTTTTTTGCAGGGTGCAAGCCCCTTTTCATGGTGATTTCA
CAATTTATTCTGGTACTCAGCTTGTAGCCTGGCTTTGTTAATTAATAAAA
CCCCTCCTAATTATTATTTTTCCCCCGTCACTGTGTTTCTTTTATACCCC
CAATCAATCTTTTTTTTTTTTTTTTTTATACCCTAGTTAACCGGTCACTT
TCCAAAATTTGCACCCTCCCTTCTATGGCATCCCACCTGGAAAACCAGTC
CCAAAAATAATATTCAAATAACTAAGGCCTGGTTTTTTTTTTTTTTAAAA
GAAAAAGATATTACCAGGCAGATTGGCCTTTTGACTCTCTTTCCCTATGG
AAGGGGCAAATAAAAAGCAAAGGGGAAAAAAAACAAAACCTTGGAACAGG
TGTTTTTTTTTTTATTTTTTACATCTAAACCCCCCTTTTTCCCCTTTTTT
ATAGAAGTATATT
back to top