EG358253

Overview
NameEG358253
Unique NameEG358253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length292
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_MATIN (Chalcone synthase OS=Matthiola incana GN=CHS PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  105 EVPKLGKEAAVRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 163
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  106 EVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 164
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  102 EVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 160
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS3_SINAL (Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  106 EVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 164
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAATKAIKEWG PKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  107 EVPKLGKEAATKAIKEWGFPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 165
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.361e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  106 EVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 164
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.092e-25
Identity = 53/59 (89.83%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADY+LTKLLGLRPSVKR+MM
Sbjct:  106 EVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMM 164
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.092e-25
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.092e-25
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.426e-25
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKR MM
Sbjct:  101 EVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMM 159
The following BLAST results are available for this feature:
BLAST of EG358253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHSY_MATIN8.361e-2691.53Chalcone synthase OS=Matthiola incana GN=CHS PE=2 ... [more]
CHSY_ARATH8.361e-2691.53Chalcone synthase OS=Arabidopsis thaliana GN=CHS P... [more]
CHSY_ARAAL8.361e-2691.53Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]
CHS3_SINAL8.361e-2691.53Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 S... [more]
CHS3_GERHY8.361e-2693.22Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]
CHS1_SINAL8.361e-2691.53Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHSY_PINSY1.092e-2589.83Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]
CHS2_SOLTU1.092e-2591.53Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS2_SOLLC1.092e-2591.53Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_PERFR1.426e-2591.53Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]

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Properties
Property NameValue
Genbank description9b1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009b1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358253 ID=EG358253; Name=EG358253; organism=Citrus sinensis; type=EST; length=292bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACCTGCCCGGGCGGCCGCTCGATGCAC
GTGGTTATGTTGCAGCCCTGTCTCTTGGTGCTCAAGGCATCTGCTTAGGC
ACAAGGTTTGTGGCAAGTGAGGAAAGCTATGCGCATCCTGAG
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