EG358253

Overview
NameEG358253
Unique NameEG358253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length292
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPG DY+LTKLLGLRPSVKR MM
Sbjct:  103 EVPKLGKEAAAKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMM 161
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_TRISU (Chalcone synthase 2 OS=Trifolium subterraneum GN=CHS2 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPG DY+LTKLLGLRPSVKR MM
Sbjct:  103 EVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMM 161
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPG DY+LTKLLGLRPSVKR MM
Sbjct:  103 EVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMM 161
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGAD+RLTKLLGLRPSVKR MM
Sbjct:  101 EVPKLGKEAALRAIKEWGQPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMM 159
The following BLAST results are available for this feature:
BLAST of EG358253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS3_RUTGR4.150e-2588.14Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHS3_PEA4.150e-2589.83Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]
CHS3_MEDSA4.150e-2589.83Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS2_TRISU4.150e-2589.83Chalcone synthase 2 OS=Trifolium subterraneum GN=C... [more]
CHS2_RUTGR4.150e-2588.14Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS2_PEA4.150e-2589.83Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHS1_TRISU4.150e-2589.83Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS1_RUTGR4.150e-2588.14Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHS1_PEA4.150e-2589.83Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHS1_DAUCA4.150e-2588.14Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]

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Properties
Property NameValue
Genbank description9b1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009b1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358253 ID=EG358253; Name=EG358253; organism=Citrus sinensis; type=EST; length=292bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACCTGCCCGGGCGGCCGCTCGATGCAC
GTGGTTATGTTGCAGCCCTGTCTCTTGGTGCTCAAGGCATCTGCTTAGGC
ACAAGGTTTGTGGCAAGTGAGGAAAGCTATGCGCATCCTGAG
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