EG358253

Overview
NameEG358253
Unique NameEG358253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length292
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGK AAT+AIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM
Sbjct:  101 EVPRLGK-AATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 158          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.150e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.420e-25
Identity = 53/59 (89.83%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            ++ +LGKEAA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  104 EIRKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 162          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.420e-25
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA  AIKEWGQPKSKITH++FCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQSAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.420e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHLVFCTTSGVDMPG DY+L KLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.420e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHLVFCTTSGVDMPG DY+L KLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.420e-25
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA  AIKEWGQPKSKITH+VFCTTSG+DMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.420e-25
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA  AIKEWGQPKSKITH+VFCTTSG+DMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.078e-25
Identity = 53/59 (89.83%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEA+ KAIKEWGQPKSKITHLVFCTTSGVDMPGAD+ LTKLLGLRPSVKRLMM
Sbjct:  107 EVPKLGKEASLKAIKEWGQPKSKITHLVFCTTSGVDMPGADWALTKLLGLRPSVKRLMM 165          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.078e-25
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = -1
Query:    2 VPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 175
            VPRLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  102 VPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159          
The following BLAST results are available for this feature:
BLAST of EG358253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS1_CITSI4.150e-2594.92Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHS1_CICAR4.150e-2589.83Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
CHSY_CHRAE5.420e-2589.83Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHSD_IPONI5.420e-2588.14Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHSB_SOLTU5.420e-2589.83Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHSA_SOLTU5.420e-2589.83Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS8_IPOBA5.420e-2588.14Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS1_IPOBA5.420e-2588.14Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSY_EQUAR7.078e-2589.83Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
CHS1_MEDSA7.078e-2591.38Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]

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Properties
Property NameValue
Genbank description9b1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009b1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358253 ID=EG358253; Name=EG358253; organism=Citrus sinensis; type=EST; length=292bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACCTGCCCGGGCGGCCGCTCGATGCAC
GTGGTTATGTTGCAGCCCTGTCTCTTGGTGCTCAAGGCATCTGCTTAGGC
ACAAGGTTTGTGGCAAGTGAGGAAAGCTATGCGCATCCTGAG
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