EG358253

Overview
NameEG358253
Unique NameEG358253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length292
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.078e-25
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWG PKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MM
Sbjct:  104 EVPKLGKEAAMKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMM 162          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.244e-25
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.244e-25
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQP+SKITHLVFCTTSGVDMPGADY+LTK+LGLRPSVKRLMM
Sbjct:  104 EVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMM 162          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.244e-25
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQP+SKITHLVFCTTSGVDMPGADY+LTK+LGLRPSVKRLMM
Sbjct:  104 EVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMM 162          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.244e-25
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQP+SKITHLVFCTTSGVDMPGADY+LTK+LGLRPSVKRLMM
Sbjct:  104 EVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMM 162          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.207e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAATKAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTK LGLRP VKR MM
Sbjct:  101 EVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.207e-24
Identity = 51/59 (86.44%), Postives = 57/59 (96.61%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA +AIKEWG+PKSKITHL+FCTTSGVDMPGAD+RLTKLLGLRPSVKR MM
Sbjct:  101 EVPKLGKEAALRAIKEWGRPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.577e-24
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = -1
Query:    2 GCNITTCIERPPGQVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 217
            G ++ T  +    +VPRLGKEAA KAIKEWGQPKSKITH++ CTTSGVDMPGADY+LTKLLGLRPSV+R M+
Sbjct:   88 GSSLDTRQDMVVSEVPRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFML 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.577e-24
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = -1
Query:    2 GCNITTCIERPPGQVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 217
            G ++ T  +    +VPRLGKEAA KAIKEWGQPKSKITH++ CTTSGVDMPGADY+LTKLLGLRPSV+R M+
Sbjct:   88 GSSLDTRQDMVVSEVPRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFML 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.577e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMM
Sbjct:  105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMM 163          
The following BLAST results are available for this feature:
BLAST of EG358253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS1_GERHY7.078e-2588.14Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHSY_PHAVU9.244e-2588.14Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHS2_SECCE9.244e-2588.14Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS1_SECCE9.244e-2588.14Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHS1_HORVU9.244e-2588.14Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]
CHSY_PUELO1.207e-2488.14Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHS9_DAUCA1.207e-2486.44Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHSY_DIAMO1.577e-2472.22Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHSY_DIACA1.577e-2472.22Chalcone synthase OS=Dianthus caryophyllus GN=CHS ... [more]
CHS7_SORBI1.577e-2488.14Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]

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Properties
Property NameValue
Genbank description9b1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009b1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358253 ID=EG358253; Name=EG358253; organism=Citrus sinensis; type=EST; length=292bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACCTGCCCGGGCGGCCGCTCGATGCAC
GTGGTTATGTTGCAGCCCTGTCTCTTGGTGCTCAAGGCATCTGCTTAGGC
ACAAGGTTTGTGGCAAGTGAGGAAAGCTATGCGCATCCTGAG
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