EG358253

Overview
NameEG358253
Unique NameEG358253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length292
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.577e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA  AIKEWGQPKSKITH+ FCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQSAIKEWGQPKSKITHVFFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.577e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMM
Sbjct:  105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMM 163
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS3_SORBI (Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.577e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMM
Sbjct:  105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMM 163
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_SORBI (Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.577e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMM
Sbjct:  105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMM 163
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.577e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMM
Sbjct:  105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMM 163
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_ONOVI (Chalcone synthase OS=Onobrychis viciifolia GN=CHS PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.059e-24
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPHVKRYMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.059e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMM
Sbjct:  105 EVPKLGKAAAHKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMM 163
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.059e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA  AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGL PSVKRLMM
Sbjct:  101 EVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS8_MEDSA (Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.690e-24
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.690e-24
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159
The following BLAST results are available for this feature:
BLAST of EG358253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS7_IPOBA1.577e-2488.14Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHS6_SORBI1.577e-2488.14Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=... [more]
CHS3_SORBI1.577e-2488.14Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=... [more]
CHS2_SORBI1.577e-2488.14Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=... [more]
CHS1_SORBI1.577e-2488.14Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHSY_ONOVI2.059e-2488.14Chalcone synthase OS=Onobrychis viciifolia GN=CHS ... [more]
CHS5_SORBI2.059e-2488.14Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]
CHS2_IPOBA2.059e-2488.14Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS8_MEDSA2.690e-2488.14Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=... [more]
CHS5_MEDSA2.690e-2488.14Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2... [more]

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Properties
Property NameValue
Genbank description9b1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009b1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358253 ID=EG358253; Name=EG358253; organism=Citrus sinensis; type=EST; length=292bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACCTGCCCGGGCGGCCGCTCGATGCAC
GTGGTTATGTTGCAGCCCTGTCTCTTGGTGCTCAAGGCATCTGCTTAGGC
ACAAGGTTTGTGGCAAGTGAGGAAAGCTATGCGCATCCTGAG
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