EG358253

Overview
NameEG358253
Unique NameEG358253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length292
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 2.690e-24
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.690e-24
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA  AIK WGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAQSAIKGWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.690e-24
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA KAIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.513e-24
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQ KSKITHLVFCTTSGVDMPGADY+LTKLLGLR SVKRLMM
Sbjct:  101 EVPKLGKEAAQKAIKEWGQSKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.588e-24
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTK LGLRP VKR MM
Sbjct:  101 EVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.826e-24
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQPKS+ITHLVFCTTSGVDMPGADY+LTK LGLRPSV RLMM
Sbjct:  105 EVPKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLRPSVNRLMM 163          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.277e-23
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA  AIKEWGQPKSKITHLVFCTT+GVDM GADY+LTKLLGL PSVKRLMM
Sbjct:  101 EVPKLGKEAAQNAIKEWGQPKSKITHLVFCTTTGVDMHGADYQLTKLLGLSPSVKRLMM 159          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.073e-23
Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = -1
Query:    2 LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 166
            LGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:    1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 55          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.625e-23
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQP+S+ITHLVFCTTSGVDMPGADY+L K+LGLRP+V RLMM
Sbjct:  104 EVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMM 162          
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.625e-23
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = -1
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGK AA KAIKEWGQP+S+ITHLVFCTTSGVDMPGADY+L K+LGLRP+V RLMM
Sbjct:  104 EVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMM 162          
The following BLAST results are available for this feature:
BLAST of EG358253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS4_MEDSA2.690e-2488.14Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]
CHS3_IPOBA2.690e-2488.14Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS2_MEDSA2.690e-2488.14Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=... [more]
CHSY_CATRO3.513e-2489.83Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS7_SOYBN4.588e-2486.44Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]
CHS2_MAIZE7.826e-2486.44Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSF_PETHY2.277e-2386.44Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
CHS6_MEDSA5.073e-2390.91Chalcone synthase 6-4 (Fragment) OS=Medicago sativ... [more]
CHSY_ORYSJ6.625e-2381.36Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI6.625e-2381.36Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]

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Properties
Property NameValue
Genbank description9b1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009b1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358253 ID=EG358253; Name=EG358253; organism=Citrus sinensis; type=EST; length=292bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACCTGCCCGGGCGGCCGCTCGATGCAC
GTGGTTATGTTGCAGCCCTGTCTCTTGGTGCTCAAGGCATCTGCTTAGGC
ACAAGGTTTGTGGCAAGTGAGGAAAGCTATGCGCATCCTGAG
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