EG358252

Overview
NameEG358252
Unique NameEG358252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358252 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 58/228 (25.44%), Postives = 93/228 (40.79%), Query Frame = 3
Query:  138 ELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWED---YFFHLIYPEDKRDMSIWPKTPSDYTEAT------------SEYARQLRSLATKIXXXXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 776
            ++  A    G   +  HG+   L          FF  P+ EK +    +  G + GY S  A+  + +L W++   + FH        D +  P   +DY  +T             +Y  +++ L+  I                            M+ NYYP CP+PE  LG   H D +ALT +L + V GL++    +W     VP +++++IGDT   LSNG
Sbjct:   85 QVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRA--RRVPGTVSGYTSAHADRFASKLPWKETLSFGFH--------DRAAAPVV-ADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSI---MRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNG 298          
BLAST of EG358252 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.657e-13
Identity = 52/240 (21.67%), Postives = 105/240 (43.75%), Query Frame = 3
Query:   75 PQLISREIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPE--DKRDMSIWPKTPSDYTEATSEYARQLRSLATKIXXXXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPE---LALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 776
            P L S  I   +  + E  +  + KA  ++G   +VNHG+  +L  R+++    FF  P    +   N     +  GYG+K     +G + W +Y      P+    +  +++ +TP  + E+  EY ++++ ++ K+                            +++N+YP   +     + +G   HTD   ++ +  N   GLQ+  KD  WV      +S  +++GD +++++NG
Sbjct:   24 PVLTSHSIPVVNLADPE-AKTRIVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLP----QSLKNRAGPPEPYGYGNKRI-GPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNG 257          
BLAST of EG358252 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.074e-12
Identity = 49/215 (22.79%), Postives = 92/215 (42.79%), Query Frame = 3
Query:  147 KAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKIXXXXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQ----PELALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 776
            KA  D+G   ++NHGI  D   +++     FF  P  EKEK           GYG+K     +G + W +Y   L+      + S++ +    +     +Y   +R++A +I                             ++N+YP CP+     E  +G   HTD   ++ +  N   G Q+  +D  W++     +S  +++GD++++++NG
Sbjct:   43 KACEDFGFFKVINHGIPLDAISQLESEAFKFFSLPQTEKEK----AGPANPFGYGNKRI-GLNGDIGWIEYL--LLTTNQDHNFSLYGEDIDKFRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNG 250          
BLAST of EG358252 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 54/227 (23.79%), Postives = 94/227 (41.41%), Query Frame = 3
Query:  132 REELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYG-SKLANNASGQLEWEDYFFHLIYPEDKRDMSIWP---KTPSDYTEATSEYARQLRSLATKIXXXXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQP-------ELALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 776
            +  L KA  D+G   ++NHG+S +L   ++     FF  P  EK      Q +G   GYG SK+  N  G + W +Y   +    D     ++P   K+P  +  A  EY   +R +   +                            +++N+YP CP         +  +G   HTD   ++ +  N   GLQ+   D  W++      S   ++GD++++++NG
Sbjct:   29 KHALVKACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEK-----TQVAGYPFGYGNSKIGRN--GDVGWVEYLL-MNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNG 247          
BLAST of EG358252 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.960e-12
Identity = 50/220 (22.73%), Postives = 99/220 (45.00%), Query Frame = 3
Query:  132 REELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFF--HLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKIXXXXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPEL--ALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 776
            + ++ KA  ++G   ++NHG+  DL  ++++    FF      K+K           GYG+K     +G L W +Y      +  E  +  +I+  TP+ + EA  EY ++++ +++K                             +++N+YP+  +  +   +G   HTD   ++ +  N   GLQ+  KD  WV      +S  + +GDT+++++NG
Sbjct:   38 KTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAINFFALHHSLKDKAGPPDPF----GYGTKRI-GPNGDLGWLEYILLNANLCLESHKTTAIFRHTPAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNG 252          
BLAST of EG358252 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.892e-11
Identity = 46/216 (21.30%), Postives = 87/216 (40.28%), Query Frame = 3
Query:  150 AAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPE--DKRDMSIWPKTPSDYTEATSEYARQLRSLATKIXXXXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPEL----ALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 776
            A  D+G   LVNHG+  +L   ++     FF +   EK++           GYGSK     +G + W +Y      P+    + + I+ + P  +      Y   ++++   +                             ++N+YP CP+ +      +G   HTD   ++ +  N   GLQ+   D  WV+      S  +++GD +++++NG
Sbjct:   44 ACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDRAGPPDPF----GYGSKRI-GPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNG 254          
The following BLAST results are available for this feature:
BLAST of EG358252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
GAOX2_ORYSI5.694e-1425.44Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
G2OX2_ARATH1.657e-1321.67Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G2OX1_PEA1.074e-1222.79Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
G2OX1_ARATH1.402e-1223.79Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G2OX3_ARATH6.960e-1222.73Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]
G2OX_PHACN5.892e-1121.30Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]

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Properties
Property NameValue
Genbank description3d1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0003d1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358252 ID=EG358252; Name=EG358252; organism=Citrus sinensis; type=EST; length=779bp
ACGACCAAAGGAAGAGCTAATGAGCATTGGCAATATTTTTGAAGAAGAGG
AAAAAGATGAAGGGCCTCAAGTTCCCACAATTGATATCAAGGGAAATTGA
CTCTGAGGACAGAGTTGAACGCGAGAAATGTCGCGAGGAGCTCAAGAAAG
CTGCCATGGATTGGGGTGTTATGCACCTTGTTAACCATGGGATTTCGGAT
GATCTCACCGAACGCGTCAAGAGAGCCGGTCAGGCCTTTTTCGATCAGCC
GGTTGAGGAGAAAGAGAAGTATGCCAATGAGCAGGCTTCGGGAAAGATTC
AGGGTTACGGAAGCAAGCTAGCTAATAATGCTAGTGGTCAGCTTGAGTGG
GAGGACTATTTCTTCCACCTTATTTATCCTGAAGATAAAAGGGATATGTC
CATTTGGCCTAAGACTCCAAGCGACTATACAGAGGCTACTAGTGAATACG
CAAGGCAACTGAGAAGCCTGGCGACGAAAATTCTGTCAGTGTTGTCACTT
GGTTTGGGACTGGAAGAGGGGAGGCTGGAAAAGGAAGTTGGTGGCCTAGA
AGAGCTCCTTCTTCAGATGAAGATCAATTACTATCCCAAATGCCCTCAAC
CAGAACTGGCTCTTGGTGTTGAAGCTCACACAGATGTGAGTGCACTCACT
TTCATTCTTCACAACATGGTTCCGGGCCTGCAGCTCTTCTACAAAGACAA
ATGGGTGACTGCTAAATGTGTTCCGAATTCGATCATCTTGCACATTGGTG
ACACCATTGAAATTCTGAGCAATGGCGAG
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