DY257351

Overview
NameDY257351
Unique NameDY257351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_CYAA5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.554e-12
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 3
Query:  171 IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWARE 380
            +AYAAG AGG M  VL+A NE+A+ +F+ EKI +LDI    E T D  R++  + PSLEDI+  D WARE
Sbjct:  310 LAYAAGNAGGAMPAVLNAANEQAVALFLAEKIAFLDIPKVIEKTCDNFRDHNRSQPSLEDILEADKWARE 379          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_SYNS3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9311) GN=dxr PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.713e-12
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  171 IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWARE 380
            +AYAAGRAGGTM  VL+A NE+A+  F++EKI +LDI    E   ++H+  L  +P L+D++  D WAR+
Sbjct:  328 LAYAAGRAGGTMPAVLNAANEEAVAQFLEEKIHFLDIPKMIEGACEQHKPDLAANPCLDDVLAVDQWARQ 397          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_NOSP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.713e-12
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  159 HQKI----IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWARE 380
            HQK     +AYA G+AGG+M  VL+A NE+A+ +F+DEKI +LDI    E   D+H+     +PSL+DI+  D WAR+
Sbjct:  302 HQKYPCMQLAYAVGKAGGSMPAVLNAANEQAVALFLDEKIRFLDIPRCIEWVCDRHQNDNRANPSLDDILAADKWARQ 379          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_SYNSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9605) GN=dxr PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 3
Query:  171 IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWAR 377
            +AYAAG AGGTM  V++A NE+A+  F++EKI +LDI    E   ++H+  L+  P L+D++  D WAR
Sbjct:  326 LAYAAGSAGGTMPAVMNAANEEAVAQFLEEKIHFLDIPTVIEAACERHKPDLMAQPQLDDVLRVDQWAR 394          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  171 IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWARE 380
            +AY+AG++GGTM  VL+A NEKA+E+F++E+  ++DI    E   +KH+  L  +PSL +I+  D WARE
Sbjct:  328 LAYSAGKSGGTMPAVLNAANEKAVELFLEERFKFIDIPKVIEAICEKHKCDLNLNPSLSEILEIDNWARE 397          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  171 IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWARE 380
            +AY+AG++GGTM  VL+A NEKA+E+F++E+  ++DI    E   +KH+  L  +PSL +I+  D WARE
Sbjct:  328 LAYSAGKSGGTMPAVLNAANEKAVELFLEERFKFIDIPKVIEAICEKHKCDLNLNPSLSEILEIDNWARE 397          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_MICAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Microcystis aeruginosa (strain NIES-843) GN=dxr PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  159 HQKI----IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWARE 380
            HQK     +AYAAGRAGG M  VL+A NE+A+ +F++EKI +LDI    E   D+   +  ++PSL+DI+  D WAR+
Sbjct:  302 HQKYPCMGLAYAAGRAGGAMPAVLNAANEQAVALFLEEKISFLDIPRVIEKVCDRFAIHNTSTPSLDDILAADNWARQ 379          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_SYNJB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. GN=dxr PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 3
Query:  171 IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWAREYAAGL 395
            +AYAAGR GGT+  VL+A NE A+ +F+ E+I +LDI    E   ++H+  ++  PSLEDI+  DAWAR   A L
Sbjct:  310 LAYAAGRRGGTLPAVLNAANEAAVALFLQERIRFLDIPRLLERVCERHQ--VIADPSLEDILQADAWARRETAQL 382          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_SYNJA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxr PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 34/70 (48.57%), Postives = 51/70 (72.86%), Query Frame = 3
Query:  171 IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWARE 380
            +AYAAG+AGGT+  VL+A NE A+ +F+ E+I +LDI    E   ++H+  ++ +PSLEDI+  DAWAR+
Sbjct:  310 LAYAAGQAGGTLPAVLNAANEAAVALFLQERIRFLDIPRLLEQVCERHQ--VIPAPSLEDILEVDAWARQ 377          
BLAST of DY257351 vs. ExPASy Swiss-Prot
Match: DXR_CYAP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7424) GN=dxr PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.931e-11
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 3
Query:  171 IAYAAGRAGGTMTGVLSATNEKALEMFIDEKIGYLDIF*AEELT*DKHREYLVTSPSLEDIIHYDAWAR 377
            +AYAAGRAGG M  VL+A NE+A+ +F++E+IG+LDI    E   D+   +    P+L+DII  D WAR
Sbjct:  310 LAYAAGRAGGAMPAVLNAANEQAVALFLEERIGFLDIPRLIETVCDRFTTHNQAHPTLDDIISADQWAR 378          
The following BLAST results are available for this feature:
BLAST of DY257351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
DXR_CYAA51.554e-1252.861-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNS37.713e-1248.571-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_NOSP77.713e-1247.441-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNSC1.316e-1146.381-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROMT1.316e-1147.141-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PROM11.316e-1147.141-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_MICAN1.316e-1147.441-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNJB2.244e-1148.001-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SYNJA2.244e-1148.571-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_CYAP72.931e-1149.281-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AE01FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257351 ID=DY257351; Name=DY257351; organism=Citrus sinensis; type=EST; length=613bp
GATCTTCAGATCATAAGTTGATGATGAAGATAAAAAAAATGAAAATAATT
TCTGTTCTTCTTTTGCCAGCTCATTAAGCACTGATATTTCCTTAACGAGT
TTGGATCTTATCAAAACTACAGTATCAAAGAAAGATACTCCAGACACAAA
TTGATATACATCAGAAAATCATTGCCTATGCTGCTGGACGGGCTGGAGGA
ACCATGACTGGAGTTCTTAGTGCAACTAACGAGAAAGCATTAGAGATGTT
CATTGATGAAAAGATTGGCTATCTGGATATTTTCTAGGCTGAGGAGCTGA
CGTGAGATAAGCACAGGGAGTACTTGGTAACCTCGCCTTCCCTAGAGGAT
ATAATACATTATGATGCATGGGCACGAGAGTATGCAGCTGGTTTGCAATT
TTCATCTGGTAGAAGCCCTGTTCCAGCATGACTGCTTGCATTGATGCCCT
ACTTGGAGAACAAGAGAGAGGTGTTTACTTTTTACCAAAAACTGCTATCT
CTCGTCAATGTTTAAAGAGGCATCGAGCAATTGTACCATAAATAAATATA
AAGTGGGGATTCAGTATGTGTCCCCGATTTTATAGGTGCAAATGTGTGAC
TGCCTTGTTTAAC
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