DY257349

Overview
NameDY257349
Unique NameDY257349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1306
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.619e-13
Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 3
Query:  414 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSGKANSQK 677
            +  K    + K  YRG+RQRPWGK+AAEIRDP K G RVWLGTF+T              +RG KA +NFP E     P++      +K
Sbjct:  143 EVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKRK 231          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.032e-13
Identity = 45/122 (36.89%), Postives = 59/122 (48.36%), Query Frame = 3
Query:  354 PFTFSAGRKSHGSTAVKHVEQAKKST-----ERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSGKANSQKSVPKACLS 701
            PF FSAG         + V    ++T     E  R   YRG+R+RPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP       P+       +++ P+   S
Sbjct:   67 PFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASS 188          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.029e-12
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 3
Query:  450 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 623
            ++RG+RQRPWGKWAAEIRDP++ VRVWLGTF+T              +RG  A++NFP
Sbjct:   86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.755e-12
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 3
Query:  444 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 629
            K  YRG+RQRPWGK+AAEIRDP  KG RVWLGTF+T              +RG KA VNFP E
Sbjct:  142 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLE 204          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.755e-12
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 3
Query:  444 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 629
            K  YRG+RQRPWGK+AAEIRDP  KG RVWLGTF+T              +RG KA VNFP E
Sbjct:  135 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLE 197          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.292e-12
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 3
Query:  435 RKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 623
            R++  QYRG+R+RPWGK+AAEIRDP K G RVWLGT+ T              +RG KAK+NFP
Sbjct:   86 RQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.292e-12
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  375 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 647
            R+  GS+AV             ++ ++RG+R+RPWG++AAEIRDP K  RVWLGTF++              +RG KAK NFP ++ +  P
Sbjct:    2 RRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPP 92          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.994e-12
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 3
Query:  423 KSTERKRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSGK 662
            K+ + + +  YRG+R+RPWGK+AAEIRDP  KG R+WLGT++T              +RG+KA +NFP +    +   SG+
Sbjct:   78 KTEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDVRVTSETCSGE 158          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.994e-12
Identity = 42/110 (38.18%), Postives = 54/110 (49.09%), Query Frame = 3
Query:  375 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNF--------PDETPAAAPKSSGKANSQKS 680
            R     + V  V  A  +T  ++K  +RG+RQRPWGKWAAEIRDP K VR+WLGT+NT              +RG  A  NF          + P  +P    K  + KS
Sbjct:   98 RAVKSESTVSPVVSATTTTTGEKK--FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKS 205          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.910e-12
Identity = 39/80 (48.75%), Postives = 47/80 (58.75%), Query Frame = 3
Query:  444 KNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSGKANSQKS 680
            + +YRG+R+RPWGK+AAEIRD  K G RVWLGTF+T              +RGK A +NFP E       SS  ANS  S
Sbjct:   17 QGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMGTGSSSTAANSSSS 96          
The following BLAST results are available for this feature:
BLAST of DY257349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EF102_ARATH4.619e-1343.82Ethylene-responsive transcription factor 5 OS=Arab... [more]
ERF1_TOBAC6.032e-1336.89Ethylene-responsive transcription factor 1 OS=Nico... [more]
CRF1_ARATH1.029e-1255.17Ethylene-responsive transcription factor CRF1 OS=A... [more]
ERF5_TOBAC1.755e-1258.73Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF5_NICSY1.755e-1258.73Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF99_ARATH2.292e-1254.69Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF82_ARATH2.292e-1239.56Ethylene-responsive transcription factor 3 OS=Arab... [more]
EF104_ARATH2.994e-1241.98Ethylene-responsive transcription factor ERF104 OS... [more]
CRF2_ARATH2.994e-1238.18Ethylene-responsive transcription factor CRF2 OS=A... [more]
ERF97_ARATH3.910e-1248.75Ethylene-responsive transcription factor 14 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AD11FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257349 ID=DY257349; Name=DY257349; organism=Citrus sinensis; type=EST; length=1306bp
CCGACACTCTCTCTTTTGGAGAAGAGCAAAGTTTACATTGAACCCAGTCT
CTTCTAAAAAGCTTTTCTCTTTAGTCCCTGAACTAAAACCAGAAGAAACG
AGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCGGGCTACATCCCGC
CCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGAGTATCTCTGGCCG
GAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGCCGATCGTCGACGA
TGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGATGAAGAAGAGTCTG
ACATTGATGGTGACGTGGACGTTGATGCCGACTTGATGATGGCTGATATT
AAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATGGATCTACAGCCGT
GAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGAAAGAGGAAGAATC
AATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATGGGCTGCTGAGATC
CGTGATCCCACAAAAGGGGTTCGTGTCTGGCTAGGAACTTTCAATACCGC
TGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGGAGGATCCGTGGGA
AGAAAGCTAAGGTTAACTTTCCAGATGAAACTCCTGCTGCTGCTCCAAAG
AGCTCAGGGAAGGCAAACTCTCAGAAATCAGTTCCCAAAGCTTGCCTAAG
CCCCGTGCAGCCAAGTTTGAACCAGAACTTCCATTACTTGAACAACTCCG
AACAGGATAACTACACAATGGGAGTATTCTGGAGAAAAAACAACAGTGAA
TCAGTATGGATATATGGGGCTCCTTCCCGGAAGAGGGAGAACTAGGAATC
AAAACCCTTGGGGCCAACAGCTGAATGAAACTCCTTTGGTACTTCAAATC
CGAACCAAGGGAAAAACCTCCTTTGGATGGGTCGGAATTTGGGGGGGGGG
AAAAAAGGGAATCAAAAAATCCCGGAATTCTTATTTTGGTTTGGGAAAGC
TCCCCCCCGAAAGGTGGAAGAATTCCCGAGGTGGGGGGGGGCGGGGGGGG
GAACACCCAAAGGAAGAAAGTAGAAAAACTCAAACCCTGGGAAAAAGGGG
GGGGGGCCGGGTTAGGGGAAAAAAAAGAGGGAAGAGAGTCCTTGTGTCGT
GGGAAGAAGCTGTTTTGTGGGGTTTTGATTGAAAAAAAAAAGGGGGAAAG
AGTTTCTTTGAGCGCCCCGAGCGGCCGCAGAACACCCGCGGAGGAAGGGA
AAAGAAGGGGGGGGGGGGGGGGGCCCCTCCCTCCCTCCCCCGCCACGGCG
GTCTCC
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