DY257349

Overview
NameDY257349
Unique NameDY257349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1306
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.940e-11
Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 3
Query:  453 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSGKANSQKSVPKACLSPVQPS 716
            YRG+RQRPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP       P+       ++S P+   S + P+
Sbjct:  103 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTVKRRS-PEPASSSISPA 190          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.534e-11
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 3
Query:  429 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 623
            T   ++  YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NFP
Sbjct:   19 TNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.310e-11
Identity = 42/101 (41.58%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  450 QYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSGKANSQKSVPKACLSPVQPSLNQNFHYLNNS 749
            +YRG+R+RPWGK+AAEIRD  K G RVWLGTF+T              +RG+ A +NFP E    +  SS  A +  S   A  S     + + F YL++S
Sbjct:   14 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHEYNMGSGVSSSTAMAGSSSASASASSSSRQVFE-FEYLDDS 113          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.310e-11
Identity = 35/82 (42.68%), Postives = 42/82 (51.22%), Query Frame = 3
Query:  381 SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 626
            SHGS         KK  + K K  YRG R R WGKW +EIR+P K  R+WLGTF T              I+G  A +NFP+
Sbjct:    4 SHGSDT--ECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPE 83          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.310e-11
Identity = 38/108 (35.19%), Postives = 53/108 (49.07%), Query Frame = 3
Query:  405 HVEQAKKSTERKRKNQ---YRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD-ETPAAAPKSSGKANSQKSVPKACLSPVQPS 716
            H + + ++  +KR      YRG+R R WGKW +EIR+P K  R+WLGTF+T              I+G  A +NFP+  T    P SS   + Q +   A      PS
Sbjct:   24 HQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPS 131          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.310e-11
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 3
Query:  453 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSGKANSQKSVPKACLSPVQPSL 719
            YRG+RQRPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP       P+   +  +++  P+   S +  +L
Sbjct:   99 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPV-RLTAKRRSPEPASSSISSAL 187          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.310e-11
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 3
Query:  411 EQAKKSTERKRKNQ---------YRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSGKANSQKS 680
            + +  S +RKRK +         YRG+RQR WGKW AEIR+P K  R WLGTF T              + G +A++N    +P++   SS   ++  S
Sbjct:   32 DSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSAASS 130          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.323e-11
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 3
Query:  375 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 623
            R+   + A   V      +   ++ ++RG+R+RPWG++AAEIRDP K  RVWLGTF++              +RG KAK NFP
Sbjct:    2 RRGRAAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFP 84          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.646e-11
Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 3
Query:  411 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 629
            E+ K++     + +Y+GIR R WGKW AEIR+P K  R+WLG++ T              +RG  A++NFP+E
Sbjct:   22 EKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEE 94          
BLAST of DY257349 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.646e-11
Identity = 40/117 (34.19%), Postives = 58/117 (49.57%), Query Frame = 3
Query:  435 RKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPA--------AAPKSSGKANSQKSVPKACLSPVQPSLNQNFHYLNNSEQDN 761
            RKR   Y+GIR R WGKW AEIR+P K  R+WLG+++T              +RG  A++NFP+  P         +A     KA    +   A  + VQ + ++ F    +S+ DN
Sbjct:   15 RKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPELLPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDN 131          
The following BLAST results are available for this feature:
BLAST of DY257349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ERF2_NICSY1.940e-1142.70Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF4_NICSY2.534e-1150.77Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF96_ARATH3.310e-1141.58Ethylene-responsive transcription factor ERF096 OS... [more]
ERF42_ARATH3.310e-1142.68Ethylene-responsive transcription factor ERF042 OS... [more]
ERF37_ARATH3.310e-1135.19Ethylene-responsive transcription factor ERF037 OS... [more]
ERF2_TOBAC3.310e-1141.11Ethylene-responsive transcription factor 2 OS=Nico... [more]
ABI4_ARATH3.310e-1135.35Ethylene-responsive transcription factor ABI4 OS=A... [more]
ERF3_TOBAC4.323e-1139.76Ethylene-responsive transcription factor 3 OS=Nico... [more]
RAP29_ARATH5.646e-1139.73Ethylene-responsive transcription factor RAP2-9 OS... [more]
ERF10_ARATH5.646e-1134.19Ethylene-responsive transcription factor ERF010 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AD11FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257349 ID=DY257349; Name=DY257349; organism=Citrus sinensis; type=EST; length=1306bp
CCGACACTCTCTCTTTTGGAGAAGAGCAAAGTTTACATTGAACCCAGTCT
CTTCTAAAAAGCTTTTCTCTTTAGTCCCTGAACTAAAACCAGAAGAAACG
AGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCGGGCTACATCCCGC
CCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGAGTATCTCTGGCCG
GAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGCCGATCGTCGACGA
TGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGATGAAGAAGAGTCTG
ACATTGATGGTGACGTGGACGTTGATGCCGACTTGATGATGGCTGATATT
AAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATGGATCTACAGCCGT
GAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGAAAGAGGAAGAATC
AATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATGGGCTGCTGAGATC
CGTGATCCCACAAAAGGGGTTCGTGTCTGGCTAGGAACTTTCAATACCGC
TGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGGAGGATCCGTGGGA
AGAAAGCTAAGGTTAACTTTCCAGATGAAACTCCTGCTGCTGCTCCAAAG
AGCTCAGGGAAGGCAAACTCTCAGAAATCAGTTCCCAAAGCTTGCCTAAG
CCCCGTGCAGCCAAGTTTGAACCAGAACTTCCATTACTTGAACAACTCCG
AACAGGATAACTACACAATGGGAGTATTCTGGAGAAAAAACAACAGTGAA
TCAGTATGGATATATGGGGCTCCTTCCCGGAAGAGGGAGAACTAGGAATC
AAAACCCTTGGGGCCAACAGCTGAATGAAACTCCTTTGGTACTTCAAATC
CGAACCAAGGGAAAAACCTCCTTTGGATGGGTCGGAATTTGGGGGGGGGG
AAAAAAGGGAATCAAAAAATCCCGGAATTCTTATTTTGGTTTGGGAAAGC
TCCCCCCCGAAAGGTGGAAGAATTCCCGAGGTGGGGGGGGGCGGGGGGGG
GAACACCCAAAGGAAGAAAGTAGAAAAACTCAAACCCTGGGAAAAAGGGG
GGGGGGCCGGGTTAGGGGAAAAAAAAGAGGGAAGAGAGTCCTTGTGTCGT
GGGAAGAAGCTGTTTTGTGGGGTTTTGATTGAAAAAAAAAAGGGGGAAAG
AGTTTCTTTGAGCGCCCCGAGCGGCCGCAGAACACCCGCGGAGGAAGGGA
AAAGAAGGGGGGGGGGGGGGGGGCCCCTCCCTCCCTCCCCCGCCACGGCG
GTCTCC
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