DY257338

Overview
NameDY257338
Unique NameDY257338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1294
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: MALF3_MALFU (Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.670e-23
Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            K+  I  VPGAFTPTC+  HVP ++EK  ELKSKGV E++ IS NDPFV+ AW  T     ++ F  D + +++      LDLS KG+G R+ R+AL+ +DLKV+   ++  G+   SSA  +L  L
Sbjct:   41 KKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDE-GEPKQSSAATVLSKL 166          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PMPA_CANBO (Putative peroxiredoxin-A OS=Candida boidinii GN=PMPA PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 2.042e-21
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLK-VKAANVESGGDFTVSSADDILKAL 551
            K+  +  VPGAFTP C+ +H+PG+I+    + SKGV  +L IS NDPFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:   38 KKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVISQNDPFVLKGWKKELGAADAKKLVFVSDPNLKLTKKLGSTIDLSAIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PMPB_CANBO (Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 4.549e-21
Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLK-VKAANVESGGDFTVSSADDILKAL 551
            K+  +  VPGAFTP C+ +H+PG+I+    + SKGV  +L I+ NDPFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:   38 KKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVITQNDPFVLKGWKKELGAADAKKLIFVSDPNLKLTKKLGSTIDLSSIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRDX5_MOUSE (Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=Prdx5 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.324e-20
Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTP CS  H+PGF+E+A  LK+KG   + C+SVND FV++ W +       V+ LAD +  +  A  L LD S   L    R +RF++++D+  VKA NVE  G   T S A +IL  L
Sbjct:   81 KKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDVFVIEEWGRAHQAEGKVRLLADPTGAFGKATDLLLDDSLVSLFGNRRLKRFSMVIDNGIVKALNVEPDGTGLTCSLAPNILSQL 210          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRDX5_BOVIN (Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PRDX5 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.258e-20
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 551
            K+  +FG+PGAFTP CS  H+PGF+E+AD LK+KG+  + C++VND FV + WA+       V+ LAD S  +     L LD S   L    R +RF+++++D  VK+ NVE  G   T S A +IL  L
Sbjct:   90 KKGVLFGLPGAFTPGCSKTHLPGFVEQADALKAKGIQVVACLTVNDVFVTEEWARAHKAEGKVRLLADPSGTFGKETDLLLDDSLLFLFGNHRLKRFSMVIEDGIVKSLNVEPDGTGLTCSLAPNILSQL 219          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRDX5_HUMAN (Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 6.569e-20
Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTP CS  H+PGF+E+A+ LK+KGV  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A +I+  L
Sbjct:   85 KKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 214          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRDX5_CERAE (Peroxiredoxin-5, mitochondrial OS=Cercopithecus aethiops GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.120e-19
Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTP CS  H+PGF+E+A+ LK+KGV  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   86 KKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRDX5_PAPHA (Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.463e-19
Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTP CS  H+PGF+E+A+ LK+KGV  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   86 KKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKVEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRDX5_RAT (Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus GN=Prdx5 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.911e-19
Identity = 56/130 (43.08%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTP CS  H+PGF+E+A  LK+KG   + C+SVND FV   W +       V+ LAD +  +     L LD S   L    R +RF++++D   VKA NVE  G   T S A +IL  L
Sbjct:   84 KKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDAFVTAEWGRAHQAEGKVQLLADPTGAFGKETDLLLDDSLVSLFGNRRLKRFSMVIDKGVVKALNVEPDGTGLTCSLAPNILSQL 213          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX5_HAEIN (Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influenzae GN=HI0572 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.496e-19
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 3
Query:  183 IFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANV---ESGGDFTVSSADDILKAL 551
            +F +PGAFTPTCS  H+P + E A   K  GV +IL +SVND FVM AW K   +++++ F+ DG+ ++T  +G+ +   + G G RS R+++LV +  V+   +   E G  F VS AD +LK L
Sbjct:   38 VFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAW-KEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYL 162          
The following BLAST results are available for this feature:
BLAST of DY257338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
MALF3_MALFU1.670e-2344.88Putative peroxiredoxin (Fragment) OS=Malassezia fu... [more]
PMPA_CANBO2.042e-2144.62Putative peroxiredoxin-A OS=Candida boidinii GN=PM... [more]
PMPB_CANBO4.549e-2143.85Putative peroxiredoxin-B OS=Candida boidinii GN=PM... [more]
PRDX5_MOUSE1.324e-2043.85Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=... [more]
PRDX5_BOVIN2.258e-2043.08Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PR... [more]
PRDX5_HUMAN6.569e-2043.08Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=... [more]
PRDX5_CERAE1.120e-1943.08Peroxiredoxin-5, mitochondrial OS=Cercopithecus ae... [more]
PRDX5_PAPHA1.463e-1943.08Peroxiredoxin-5, mitochondrial OS=Papio hamadryas ... [more]
PRDX5_RAT1.911e-1943.08Peroxiredoxin-5, mitochondrial OS=Rattus norvegicu... [more]
PRX5_HAEIN2.496e-1941.27Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influen... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2AC07FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257338 ID=DY257338; Name=DY257338; organism=Citrus sinensis; type=EST; length=1294bp
GTACCTACAGGCAAAGGAAAACATAGAAAATAAGGAAAATATCTATTTTT
ACTCGATAACTAAATGTATGGGGTTGTAAAATAGTTATTATATGTCTGAT
TTTACGCTTTTTAACTTGTACGATATTCATCAGGTTTATTATGTGACCAT
ACATTCGCTCGCTGCCGGTAAAAAGGTCATCCATCTTTGGCGTCCCCGGT
GCTTTCACTCCTACTTGCAGCTTGAAGCATGTGCCTGGATTCATCGAGAA
GGCTGATGAGTTGAAGTCAAAAGGCGTCTATGAAATTCTCTGCATAAGCG
TTAATGACCCATTTGTGATGAAGGCATGGGCCAAAACATTTCCTGAGAAC
AAGAGCGTGAAGTTCCTGGCTGATGGCTCAGCAAAATACACCCATGCTTT
GGGGCTTGAGCTTGACCTCAGTGAGAAAGGACTTGGCACCCGGTCAAGGA
GGTTTGCTCTCTTGGTTGATGACCTCAAGGTGAAGGCCGCAAATGTTGAA
TCTGGTGGAGATTTCACAGTCTCCAGTGCTGATGACATCCTCAAGGCTCT
TTAAATTTGCAGTTCCATCCCAGCTGCTTAGTGTTGGTTGAGTTATTACT
TCCTTTTGCTGTGCTATGCTTAGGATGAATATAAACCAGTGGATCTCGAA
TATTGTTATGTATGACGCGAGAAGTCTTTTGTTTAAACTGTTGTTCATCT
TTATCGGAATAAAAGGGTGTGTTTTTGTGTCATTACAAAAGAAAACAATA
AAAAAATAATTATTATTTAATTAAAATGTTAGAAGAATCCCCCCCTCTCC
CCCTTTTTTTGGAAACAATTGGAATATTAAGAAAAACTTTTTTTTACTAT
TTTTTTCGCACCAAAAATTGTCTTATTCTCAAAAAAATAAATTTTTTTAT
TTCCCTCAAGCAAAAATTCCCCAAAAGGGGAGGGAATAACAAGCGCCCAC
AATTTTTCCCTGCCCCCTCCCGGCCCTGTGTTTAAAAATTCTTAAAGTTA
TTCTTGTCACACAAAAGAAAATTGTCCCCCAGATTACAAAACCTCTCTCG
ACACAACAAAAAGAAACGGGCACTATTTTTATAAAAATAAGGTATTTTCC
CCCTCCCATTTTTTTGAAAACGCCCTTTTTCTCTTGGGAGAAAAAAGAAA
AAAAAATCCCCCGCACCCATGCGTCCTCTATGAAAAGGGGAAAGATAACA
TATGGTGTCTGCGCGGGGCCTCCTCCCCCCCCCCACCCTCCCACACCAAC
CAACCCCACCTAACCATCACTCACTCTCATATTCTATGTACTAT
back to top