DY257338

Overview
NameDY257338
Unique NameDY257338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1294
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: Y1621_SYNY3 (Putative peroxiredoxin sll1621 OS=Synechocystis sp. (strain PCC 6803) GN=sll1621 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.561e-19
Identity = 53/134 (39.55%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGD------FTVSSADDILKAL 551
            K+  +F +PGAFTPTCS  H+P + +  +E ++ GV +I+C+SVND FVM  W K    +K VK L DG+ ++T  +G+ ++ S  G G RS R+++ V+D K++   +E   GD      F  S AD +L  L
Sbjct:   40 KKVVLFSLPGAFTPTCSSNHLPRYEQLFEEFQALGVDDIICLSVNDAFVMFQWGKQIGADK-VKLLPDGNGEFTRKMGMLVEKSNLGFGMRSWRYSMFVNDGKIEKMFIEPEFGDNCPVDPFECSDADTMLAYL 172          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: MALF2_MALFU (Putative peroxiredoxin OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.486e-19
Identity = 50/126 (39.68%), Postives = 72/126 (57.14%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVK--AANVESGGDFTVSSADDIL 542
            K+  I  +PGA+TP C  +H+P  +++ DELK+KGV  +  I+ NDPFVM AW         V F  D    ++ ALG  +DLS K  G R+ R+AL++DD K+   A++    G    +S D IL
Sbjct:   49 KKVVIVSIPGAYTPICHQQHIPPLVKRVDELKAKGVDAVYVIASNDPFVMAAWGNFNNAKDKVVFATDIDLAFSKALGATIDLSAKHFGERTARYALIIDDNKIVDFASDEGDTGKLQNASIDTIL 174          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: YRP2_RHIET (Putative peroxiredoxin in rpoN2 3'region OS=Rhizobium etli PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.985e-17
Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GD------FTVSSADDILKAL 551
            KR  +F +PGAFTP CS   +P F     E K  G+ +I C+SVND FVM AW K+    K+VK + DGS ++T  +G+ +     G G RS R+A ++++  V+    E G GD      + VSS  +ILK L
Sbjct:   41 KRVILFSLPGAFTPICSTFQLPDFESLYVEFKKNGIDDIYCLSVNDAFVMNAWGKS-QGLKNVKLIPDGSGEFTRKMGMLVAKDNLGFGLRSWRYAAVINNGVVEGWFEEEGFGDNCATDPYGVSSPQNILKCL 173          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: Y4VD_RHISN (Putative peroxiredoxin y4vD OS=Rhizobium sp. (strain NGR234) GN=NGR_a01200 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.205e-17
Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-------GDFTVSSADDILKAL 551
            KR  +F +PGAFTPTCS + +P F    DE    G+  + C+SVND FVM AW K     K V+ + DGS ++T  +G+ +     G G RS R+A +V+D  V+    E G         +  SS  +IL+ L
Sbjct:   41 KRVVLFSLPGAFTPTCSTQQLPDFERLYDEFGKVGIEAVYCLSVNDAFVMNAWGKALGLEK-VRLIPDGSGEFTRKMGMLVAKDNLGFGMRSWRYAAVVNDSVVEQWFEEEGFSDNCESDPYWASSPQNILETL 173          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PMP20_LIPKO (Putative peroxisomal peroxiredoxin OS=Lipomyces kononenkoae PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.160e-16
Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 3
Query:  183 IFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTF-PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            I  +PGAFTPTC+  H+P F+EK   LKS GV  ++ +S NDPFV  A+ K     +++  F +D  A+++ + GL LDL     GTR+ R+A++V +  VK    +S G    S  D +L AL
Sbjct:   45 IVAIPGAFTPTCTANHIPPFVEKFTALKSAGVDAVIVLSANDPFVQSAFGKALGVTDEAFIFASDPGAEFSKSAGLSLDL-PPAFGTRTARYAIIVSNGVVKYVEKDSEG-VAGSGVDAVLAAL 166          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PMP20_EMENI (Putative peroxiredoxin pmp20 OS=Emericella nidulans GN=AN8692 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.583e-16
Identity = 49/129 (37.98%), Postives = 80/129 (62.02%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAK-TFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 551
            K+  +F +PGAFTP CS +HVP +IE+  E+++KGV  +  ++ ND FVM AW K    +N  + FL+D  AK++ ++G      E+G   R++R+A+++D  KV  A +E +      SSA+ ++K L
Sbjct:   46 KKVILFALPGAFTPVCSARHVPEYIERLPEIRAKGVDVVAVLAYNDAFVMSAWGKANGVKNDDILFLSDPEAKFSKSIGW---ADEEG---RTKRYAIVLDHGKVTYAALEPAKNHLEFSSAETVIKHL 168          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PMP20_SCHPO (Putative peroxiredoxin pmp20 OS=Schizosaccharomyces pombe GN=pmp20 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16
Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  183 IFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFP--ENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GDFTVSSADDILKAL 551
            I GVPGAFTP CS   VPG+I    +  +KG+  I  ++VND FV KAW K+F   E   V F+AD + ++T A     D S      RS+R+A +V++ KV    +E+   D  +SSAD +L +L
Sbjct:   32 IVGVPGAFTPPCS-SQVPGYIANEKQFAAKGISGIYVVAVNDVFVTKAWKKSFDGGEQSGVHFVADWNGEFTKAFDAGFDASGLLGPLRSKRYAAVVENGKVVKVFIENEVTDVDISSADKVLSSL 156          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PMP20_ASPFU (Putative peroxiredoxin pmp20 OS=Aspergillus fumigatus GN=pmp20 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.816e-16
Identity = 48/129 (37.21%), Postives = 78/129 (60.47%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFP-ENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 551
            K+  +F +PGAFTP CS +HVP +IEK  E+++KGV  +  ++ ND +VM AW K        + FL+D  A+++ ++G      E+G   R++R+AL++D  K+  A +E +      SSA+ +LK L
Sbjct:   46 KKVILFALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGKANQVTGDDILFLSDPDARFSKSIGW---ADEEG---RTKRYALVIDHGKITYAALEPAKNHLEFSSAETVLKHL 168          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: AHP1_YEAST (Peroxiredoxin type-2 OS=Saccharomyces cerevisiae GN=AHP1 PE=1 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 1.851e-14
Identity = 46/132 (34.85%), Postives = 77/132 (58.33%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADEL-KSKGVYEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDD--LKVKAANVESGGDFTVSSADDILKAL 551
            K+  I G P AF+PTC++ H+PG+I   DEL K K V +++ ++V++PF  +AWAK+    +   +KF +D    +T ++G EL + +      S R+A++V++  +   A     G D TVSS + +L  L
Sbjct:   47 KKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVGDGVYW--SGRWAMVVENGIVTYAAKETNPGTDVTVSSVESVLAHL 176          
The following BLAST results are available for this feature:
BLAST of DY257338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
Y1621_SYNY35.561e-1939.55Putative peroxiredoxin sll1621 OS=Synechocystis sp... [more]
MALF2_MALFU9.486e-1939.68Putative peroxiredoxin OS=Malassezia furfur PE=1 S... [more]
YRP2_RHIET3.985e-1740.30Putative peroxiredoxin in rpoN2 3'region OS=Rhizob... [more]
Y4VD_RHISN5.205e-1738.06Putative peroxiredoxin y4vD OS=Rhizobium sp. (stra... [more]
PMP20_LIPKO1.160e-1640.32Putative peroxisomal peroxiredoxin OS=Lipomyces ko... [more]
PMP20_EMENI2.583e-1637.98Putative peroxiredoxin pmp20 OS=Emericella nidulan... [more]
PMP20_SCHPO5.755e-1641.27Putative peroxiredoxin pmp20 OS=Schizosaccharomyce... [more]
PMP20_ASPFU9.816e-1637.21Putative peroxiredoxin pmp20 OS=Aspergillus fumiga... [more]
AHP1_YEAST1.851e-1434.85Peroxiredoxin type-2 OS=Saccharomyces cerevisiae G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AC07FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257338 ID=DY257338; Name=DY257338; organism=Citrus sinensis; type=EST; length=1294bp
GTACCTACAGGCAAAGGAAAACATAGAAAATAAGGAAAATATCTATTTTT
ACTCGATAACTAAATGTATGGGGTTGTAAAATAGTTATTATATGTCTGAT
TTTACGCTTTTTAACTTGTACGATATTCATCAGGTTTATTATGTGACCAT
ACATTCGCTCGCTGCCGGTAAAAAGGTCATCCATCTTTGGCGTCCCCGGT
GCTTTCACTCCTACTTGCAGCTTGAAGCATGTGCCTGGATTCATCGAGAA
GGCTGATGAGTTGAAGTCAAAAGGCGTCTATGAAATTCTCTGCATAAGCG
TTAATGACCCATTTGTGATGAAGGCATGGGCCAAAACATTTCCTGAGAAC
AAGAGCGTGAAGTTCCTGGCTGATGGCTCAGCAAAATACACCCATGCTTT
GGGGCTTGAGCTTGACCTCAGTGAGAAAGGACTTGGCACCCGGTCAAGGA
GGTTTGCTCTCTTGGTTGATGACCTCAAGGTGAAGGCCGCAAATGTTGAA
TCTGGTGGAGATTTCACAGTCTCCAGTGCTGATGACATCCTCAAGGCTCT
TTAAATTTGCAGTTCCATCCCAGCTGCTTAGTGTTGGTTGAGTTATTACT
TCCTTTTGCTGTGCTATGCTTAGGATGAATATAAACCAGTGGATCTCGAA
TATTGTTATGTATGACGCGAGAAGTCTTTTGTTTAAACTGTTGTTCATCT
TTATCGGAATAAAAGGGTGTGTTTTTGTGTCATTACAAAAGAAAACAATA
AAAAAATAATTATTATTTAATTAAAATGTTAGAAGAATCCCCCCCTCTCC
CCCTTTTTTTGGAAACAATTGGAATATTAAGAAAAACTTTTTTTTACTAT
TTTTTTCGCACCAAAAATTGTCTTATTCTCAAAAAAATAAATTTTTTTAT
TTCCCTCAAGCAAAAATTCCCCAAAAGGGGAGGGAATAACAAGCGCCCAC
AATTTTTCCCTGCCCCCTCCCGGCCCTGTGTTTAAAAATTCTTAAAGTTA
TTCTTGTCACACAAAAGAAAATTGTCCCCCAGATTACAAAACCTCTCTCG
ACACAACAAAAAGAAACGGGCACTATTTTTATAAAAATAAGGTATTTTCC
CCCTCCCATTTTTTTGAAAACGCCCTTTTTCTCTTGGGAGAAAAAAGAAA
AAAAAATCCCCCGCACCCATGCGTCCTCTATGAAAAGGGGAAAGATAACA
TATGGTGTCTGCGCGGGGCCTCCTCCCCCCCCCCACCCTCCCACACCAAC
CAACCCCACCTAACCATCACTCACTCTCATATTCTATGTACTAT
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