DY257336

Overview
NameDY257336
Unique NameDY257336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY257336 vs. ExPASy Swiss-Prot
Match: Y3800_DROME (CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster GN=CG3800 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.424e-12
Identity = 49/175 (28.00%), Postives = 67/175 (38.29%), Query Frame = 1 
Query:   25 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSL---------EHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLACARSRGETVEASPSSCYKCGAEGHFAREC 513
            TCY C   GH A +C S      P  V G             G       + C+ C + GH A+ CP++       A+ C +C   GH    C  +          CY C   GH    C   +++  P  VSC++C + GH    C  +          +CY CG  GH  REC
Sbjct:    6 TCYKCNRPGHFARDC-SLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQFGHFARACPEE-------AERCYRCNGIGHISKDCTQA------DNPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETS--------KTCYGCGKSGHLRREC 158
The following BLAST results are available for this feature:
BLAST of DY257336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
Y3800_DROME9.424e-1228.00CCHC-type zinc finger protein CG3800 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AC01FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257336 ID=DY257336; Name=DY257336; organism=Citrus sinensis; type=EST; length=1136bp
GATCCTCCAGATCGCGGGTGGCAAACGTGCTATAATTGTGGCGAAGAGGG
GCATATGGCGGTGAACTGTAGATCTGCTGTCAAGCGGAAGAAACCTTGTT
TTGTTTGTGGGAGTTTGGAACATGGTGTCAGGCAATGTTCCAAGGCACAA
GATTGCTTCATTTGCAAAAAAGGTGGTCACCGTGCGAAAGATTGTCCAGA
TAAGCACAAGAGTGGCTTCCAGAATGCTCAAGTGTGTTTAAAATGTGGAG
ATTCTGGGCATGATATGTTTTCTTGTAGGAACAGTTATTCTCTCGATGAC
CTCAAGGAAGTACAATGTTACATCTGCAGGTGTTTTGGCCATTTGTGTTG
CGTTAATATCAGTGATGCGGTTCCAGGAGAGGTTTCTTGTTTCAGATGTG
GTCAATTAGGTCACACTGGTTTGGCATGCGCTAGGTCTCGTGGTGAAACT
GTAGAAGCGTCACCTAGTTCATGCTACAAGTGTGGTGCAGAAGGGCATTT
TGCACGTGAATGTGTGAGTTCTTCCAAGGTTCGCAAGAGGAATATTGACG
CATCAACTCCAACATTCAGACCTCATAGAGAAAATAAAGACCACTCGGGA
ATTAAGTCTGCGCCTCATGATCTTGGTAAAGTGCATAAAAGGAAGAAAAC
CCAGCATGAAGAAAGAGGCATTATGACATCTCGAAAATCAAAACAGAGAG
GTGGTTGGATAACAGACGATCCTGGAGATATCTCCTATGGGAAGCCGAAG
AGGAACCATTGGAGGTCTCCGGGAACACCATCTAGTAAGGCTCATAAAAT
TTCAGCTATAACCTCTGGAGCCATTTTTTCAGTCCTCAGTCCTCCATAAA
GAGGAATTCTCATCATAAATTTTCACCATCAAGGTTCCACAACTCTGGGA
GTGAAGGGAAAAGGAGAAGTTAAGAATTGGGGGGAAAGAACCTTTTATTT
TTTTTCCCACTAATAATTTTAAGGGCCTTTTGGTGGGGACCAAAACGGTG
AAAGGGGGCGCCTGCTTCCGGCCCCCCCCGGTGAATTTTGTAACCCTCCT
TGTAACCCTTGAAGGTATCCCCCCACGAAATTTTAGTTTTTTACATAATT
TCTTTTTATTAATATTTTTTTTTTTACCTTTTTTTT
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