GR312957

Overview
NameGR312957
Unique NameGR312957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_ECO24 (NAD-dependent malic enzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15
Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T+NE LLKD  Y+GL+  R  G+EY E++DEFM AV   +   V++QFEDF +  AF+LL +Y   + +FNDDIQG
Sbjct:  241 TDNENLLKDPLYLGLQDHRLDGEEYIEVIDEFMEAVFTRW-PHVIVQFEDFQSKWAFKLLQRYRNNYRMFNDDIQG 315          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  199 TNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRDEICSFNDDIQG 273          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.216e-14
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = -2
Query:  353 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 598
            YW SPVAW +YG+   QVGD    +E+  G   K+ V +F+++   +  DF+ VV   H+ W+ +F FVFAY IK +N+Q+R
Sbjct: 1381 YWASPVAWTIYGIFASQVGDRTDELELT-GETEKIQVNEFLKEYLGYDHDFLLVVVFAHVGWVLLFFFVFAYGIKFLNYQKR 1461          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14
Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T+N++LL D  Y+G R RR  GQ+YA+ ++ FM AV + + + VLIQFEDFA  NA  LL +Y   +  FNDDIQG
Sbjct:  196 TDNQELLDDPMYMGWRHRRIEGQDYADFVEAFMEAVHRRWPD-VLIQFEDFAQRNAMPLLERYKDQYCCFNDDIQG 270          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14
Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN QLL D  Y+G R  R TG+EY E +D F+ AVK+ + E VL+QFEDFA  NA  LL KY      FNDDIQG
Sbjct:  195 TNNSQLLADPMYMGWRNPRITGEEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQTNATPLLNKYRDQICCFNDDIQG 269          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.074e-14
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = -2
Query:  353 YWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 598
            YW  P+AW LYGLV  Q GDL+    + D N T   V+QF+  N+ FK DF+ VV+ + + +  VF F FA  IKA NFQRR
Sbjct: 1360 YWGCPIAWTLYGLVASQFGDLQD--PLTDQNQT---VEQFLRSNFGFKHDFLGVVAAVIVAFAVVFAFTFALGIKAFNFQRR 1436          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.074e-14
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T+N QLL+D  Y+G R +R  G EYAE ++EFM AV + + +  LIQFEDFA  NA  LL +Y   +  FNDDIQG
Sbjct:  196 TDNPQLLEDPMYMGWRHQRIGGDEYAEFVEEFMQAVSRRWPD-ALIQFEDFAQKNAMPLLERYKDQYCSFNDDIQG 270          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R  R +G EY E +D F+ AVK+ + E VL+QFEDFA  NA  LL KY      FNDDIQG
Sbjct:  195 TNNQQLLDDPMYMGWRNPRISGDEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQENATPLLNKYRDQLCCFNDDIQG 269          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14
Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN+QLL D  Y+G R +R +G EY E +D F+ AVK+ + E VL+QFEDFA  NA  LL +Y      FNDDIQG
Sbjct:  195 TNNQQLLDDPMYMGWRNQRISGDEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQENATPLLNRYRDQLCCFNDDIQG 269          
The following BLAST results are available for this feature:
BLAST of GR312957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
MAO1_ECO247.130e-1555.26NAD-dependent malic enzyme OS=Escherichia coli O13... [more]
MAOM_SOLTU9.312e-1551.32NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAO1_CITK89.312e-1555.26NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
PDR2_NICPL1.216e-1442.68Pleiotropic drug resistance protein 2 OS=Nicotiana... [more]
MAO1_SHEDO1.588e-1451.32NAD-dependent malic enzyme OS=Shewanella denitrifi... [more]
MAO1_PSYIN1.588e-1456.58NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
PDR1_NICPL2.074e-1448.78Pleiotropic drug resistance protein 1 OS=Nicotiana... [more]
MAO1_SHEFN2.074e-1452.63NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_PSYCK2.709e-1455.26NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_PSYA22.709e-1453.95NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]

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Properties
Property NameValue
Genbank descriptionC06054C09 RindPdigS Citrus sinensis cDNA clone N10A03, mRNA sequence.