GO242679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.476e-36 Identity = 77/122 (63.11%), Postives = 93/122 (76.23%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXXEGVPEGLYM 367 FD RGDVKVI+ATN+IE+LDPAL+RPGRIDRKI F PD+ T+++I IHTS+M L++DVNLE V TKD+ SGADI+A+CTEAGLLALRERRM+VT DF E EGLY+ Sbjct: 316 FDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENLEGLYL 437
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.749e-35 Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXXEGVPEGLY 364 FD+R D+KVI+ATN+IE+LDPAL+RPGRIDRKIEF +PD T+++IF IHTSRMTL + VN+E + +K++ SGADIKAICTEAG++ALRERR VT DF + V GLY Sbjct: 303 FDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKVFFSKQKMVSAGLY 423
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.881e-32 Identity = 71/117 (60.68%), Postives = 84/117 (71.79%), Query Frame = 2 Query: 8 SRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXXEGVPEG 358 S+ D+KVI+ATNRI LDPAL+RPGRIDRKI F PD T+R+IF IHTS+M L +DVNLEE + KD+ SGA+IKAI +EAGLLALRERRM+V DF EG P G Sbjct: 328 SQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDEGGPAG 444
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.133e-28 Identity = 64/101 (63.37%), Postives = 76/101 (75.25%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD RGDVKVI ATNRI+ LDPA+LRPGR DR IE PLP + R +IF+IHT +M LA+DV+ +E + SGADIKAICTEAG+ A+RE R KVT DF Sbjct: 275 FDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDF 375
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.791e-27 Identity = 59/101 (58.42%), Postives = 78/101 (77.23%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 299 FDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.791e-27 Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF T++M L+++V+LEEFV D SGADI AIC EAG+ A+RE R V DF Sbjct: 296 FDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDF 396
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.791e-27 Identity = 59/101 (58.42%), Postives = 78/101 (77.23%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 299 FDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.791e-27 Identity = 59/101 (58.42%), Postives = 78/101 (77.23%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 299 FDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.791e-27 Identity = 59/101 (58.42%), Postives = 78/101 (77.23%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 299 FDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.760e-27 Identity = 58/101 (57.43%), Postives = 80/101 (79.21%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IFQ+ TS+M L+D+V+LE++V D+ SGA+I++IC EAG+ A+R+ R + DF Sbjct: 284 FDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDF 384 The following BLAST results are available for this feature:
BLAST of GO242679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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