GO242679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 116.316 bits (290), Expect = 1.172e-25 Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 F++ ++K+I+ATNR++ LDPALLRPGRIDRKIEFP P + R I +IH+ +M L +NL + + SGAD+K +CTEAG+ ALRERR+ VT DF Sbjct: 282 FETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDF 382
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.172e-25 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 F VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 320 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.172e-25 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 F VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 320 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25 Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 F+SRG+V ++ ATNR + LDPALLRPGR DR IE PLP+ RR I +IHTS M LA++V++E D SGAD+KAICTEAG+ A+R+ R +VT DF Sbjct: 285 FESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25 Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC G+LA+RE V DF Sbjct: 299 FDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDF 399
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 F S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +VTH DF Sbjct: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 404
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 F S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +VTH DF Sbjct: 310 FSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 410
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25 Identity = 53/101 (52.48%), Postives = 74/101 (73.27%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 F S ++KVI ATNRI+ LDPALLR GR+DRKIEFPLP+ + R I QIH+ +M ++ DVN +E + ++F+GA +KA+C EAG++ALR ++ H DF Sbjct: 302 FSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDF 402
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 F VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 285 FQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDY 385
BLAST of GO242679 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.000e-25 Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 2 Query: 2 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 304 FD +VKVI+ATNR +++DPALLRPGR+DRKIEFPLPD + +R +F TS+M+L D V++E V ++ S ADI +IC EAG+LA+R R VT DF Sbjct: 268 FDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDF 368 The following BLAST results are available for this feature:
BLAST of GO242679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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