GO242676

Overview
NameGO242676
Unique NameGO242676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB5_RAT (Cytochrome b5 OS=Rattus norvegicus GN=Cyb5a PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.636e-20
Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   21 DAKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI---DVSTIPKKKE 281
            D K +TL E+  H + K  W+I++ KVYD+TKFLE+HPGG+EVL    G DAT++FEDVGHS  ARE+   Y +GE+   D S I K  E
Sbjct:    8 DVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHPDDRSKIAKPSE 97          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB5_HORSE (Cytochrome b5 OS=Equus caballus GN=CYB5A PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 1.636e-20
Identity = 47/88 (53.41%), Postives = 61/88 (69.32%), Query Frame = 3
Query:   27 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI---DVSTIPKKKE 281
            K +TL E+  HN+ K  WLI++ KVYD+TKFLEDHPGG+EVL    G DAT++FED+GHS  ARE+   + +GE+   D S I K  E
Sbjct:   10 KYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEDHPGGEEVLREQAGGDATENFEDIGHSTDARELSKTFIIGELHPDDRSKIAKPVE 97          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB5_MOUSE (Cytochrome b5 OS=Mus musculus GN=Cyb5a PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   21 DAKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI---DVSTIPKKKE 281
            D K +TL E+  H + K  W+I++ KVYD+TKFLE+HPGG+EVL    G DAT++FEDVGHS  ARE+   Y +GE+   D S I K  +
Sbjct:    8 DVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHPDDRSKIAKPSD 97          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB5_MORAP (Cytochrome b5 OS=Mortierella alpina PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.362e-19
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 3
Query:   21 DAKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTP 290
            + K FTLA++S H      +L I+GKVYD T F+++HPGG+EVL+   G+DAT+ FEDVGHS  AR++M +  VGE    +  K K  +P
Sbjct:    3 ELKSFTLADLSQHTTKDSLYLAIHGKVYDCTGFIDEHPGGEEVLIDEAGRDATESFEDVGHSDEARDIMSKLLVGEFKTDSSEKPKAKSP 92          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB51_SCHPO (Probable cytochrome b5 1 OS=Schizosaccharomyces pombe GN=SPBC29A10.16c PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.085e-19
Identity = 39/90 (43.33%), Postives = 63/90 (70.00%), Query Frame = 3
Query:   27 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPK 296
            K F   E+ +HNN KD +++INGKVYDV+ F +DHPGG +++L   G+DAT  ++D+GHS +A E++++ Y+G++   T  + KE   P+
Sbjct:    4 KYFEPEEIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADELLEEMYIGDLKPGTEERLKELKKPR 93          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB5_CHICK (Cytochrome b5 OS=Gallus gallus GN=CYB5A PE=1 SV=4)

HSP 1 Score: 94.3597 bits (233), Expect = 4.029e-19
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 3
Query:   15 GGDA---KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPK 272
            GG+A   + + L EV  HNN +  W+I++ ++YD+TKFL++HPGG+EVL    G DAT++FEDVGHS  AR + + + +GE+     PK
Sbjct:    8 GGEAWRGRYYRLEEVQKHNNSQSTWIIVHHRIYDITKFLDEHPGGEEVLREQAGGDATENFEDVGHSTDARALSETFIIGELHPDDRPK 96          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB5_NEUCR (Probable cytochrome b5 OS=Neurospora crassa GN=B23L21.190 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.872e-19
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 3
Query:   33 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQDKTSEFIIRLLQFLVPLAILGLAVGIRI 398
            FT  +V++HN  KD +++I+ KVYD+TKF+++HPGG+EVLL   G+D+T+ FEDVGHS  ARE ++   VG     T+ ++     PK P             L   L P A  G A G+ I
Sbjct:    5 FTYQDVAEHNTKKDLYVVIHDKVYDITKFVDEHPGGEEVLLDVAGQDSTEAFEDVGHSDEAREALEPLLVG-----TLKRQAGDPKPKAP-------------LPSSLAPAAQTGTATGLGI 108          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB5_YEAST (Cytochrome b5 OS=Saccharomyces cerevisiae GN=CYB5 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 5.818e-18
Identity = 41/111 (36.94%), Postives = 71/111 (63.96%), Query Frame = 3
Query:   27 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQDKTSEFIIRLLQFLV 359
            KV++  EV++HN  ++ W+II+ KVYDV++F ++HPGGDE+++   G+DAT+ F D+GHS  A  ++   Y+G++D ++     E     +   NQ K S  ++ +L  L+
Sbjct:    3 KVYSYQEVAEHNGPENFWIIIDDKVYDVSQFKDEHPGGDEIIMDLGGQDATESFVDIGHSDEALRLLKGLYIGDVDKTSERVSVEKVSTSE---NQSKGSGTLVVILAILM 110          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.296e-17
Identity = 34/83 (40.96%), Postives = 59/83 (71.08%), Query Frame = 3
Query:   30 VFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKK 278
            ++T  EV+ H    D W+I+NGKVY+++ ++++HPGG+EV+L   G DAT+ F+D+GHS  A E++++ Y+G +  + I + K
Sbjct:   10 IYTHEEVAQHTTHDDLWVILNGKVYNISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLKGAKIVEAK 92          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: CYB52_SCHPO (Probable cytochrome b5 2 OS=Schizosaccharomyces pombe GN=SPCC16A11.10c PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.211e-17
Identity = 35/75 (46.67%), Postives = 55/75 (73.33%), Query Frame = 3
Query:   27 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI 251
            K  T+ EV  HN   D ++++  KVYD++KFL+ HPGG+EVL+   G+DA+  FEDVGHS  A+E+++++Y+G +
Sbjct:    4 KTITVEEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGEEVLVDLAGRDASGPFEDVGHSEDAQELLEKFYIGNL 78          
The following BLAST results are available for this feature:
BLAST of GO242676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
CYB5_RAT1.636e-2052.22Cytochrome b5 OS=Rattus norvegicus GN=Cyb5a PE=1 S... [more]
CYB5_HORSE1.636e-2053.41Cytochrome b5 OS=Equus caballus GN=CYB5A PE=1 SV=3[more]
CYB5_MOUSE3.644e-2051.11Cytochrome b5 OS=Mus musculus GN=Cyb5a PE=1 SV=2[more]
CYB5_MORAP2.362e-1947.78Cytochrome b5 OS=Mortierella alpina PE=1 SV=1[more]
CYB51_SCHPO3.085e-1943.33Probable cytochrome b5 1 OS=Schizosaccharomyces po... [more]
CYB5_CHICK4.029e-1946.07Cytochrome b5 OS=Gallus gallus GN=CYB5A PE=1 SV=4[more]
CYB5_NEUCR6.872e-1940.98Probable cytochrome b5 OS=Neurospora crassa GN=B23... [more]
CYB5_YEAST5.818e-1836.94Cytochrome b5 OS=Saccharomyces cerevisiae GN=CYB5 ... [more]
CYB5_CANTR1.296e-1740.96Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB52_SCHPO2.211e-1746.67Probable cytochrome b5 2 OS=Schizosaccharomyces po... [more]

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Properties
Property NameValue
Genbank description1324 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1515 5, mRNA sequence.