GO242676

Overview
NameGO242676
Unique NameGO242676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.401e-17
Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 3
Query:   18 GDAKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQP 302
            G  + +T+ EV+ HN  + CW +  GKVYD T +L++HPGG E +L   G DATD+F  + HS  A+ M+ QYY+G++  S         P  QP
Sbjct:  495 GGPRQYTMEEVAAHNTEESCWFVHGGKVYDATPYLDEHPGGAESILIVAGADATDEFNSI-HSSKAKAMLAQYYIGDLVASKPAAAGATVPEPQP 588          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.097e-16
Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = 3
Query:   27 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI-------DVST--------------IPKKKEYTPPKQ--PHYNQDKTS-EFIIRLLQFLVPL--AILGLAVGIRIYTKSS*CSRLC 431
            K ++L+EV  HNN    W+I+NG VYD T+FL+DHPGG++ +L   G D T++FE + HS  A++M++ Y +GE+       D S+               P ++    P++  P     KTS    +RLL+F +P    ++GL VG  ++  ++   +LC
Sbjct:  516 KSYSLSEVRRHNNRDSAWIIVNGHVYDCTRFLKDHPGGEDSILLNAGTDCTEEFEAI-HSDKAKKMLEDYRIGELMTTDYTSDSSSSNNSVHGNSETTHLAPIREVALNPREKIPCKLLSKTSISHDVRLLRFALPAEDQVMGLPVGNHVFLCATVDEKLC 675          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.433e-16
Identity = 53/169 (31.36%), Postives = 85/169 (50.30%), Query Frame = 3
Query:   24 AKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI---------------------DVSTIPKKKEYTPPKQPHYNQ---------DKTS-EFIIRLLQFLVPL--AILGLAVGIRIYTKSS*CSRLC 431
            +K +T++EV  HNN    W+I++G VYD T+FL+DHPGG + +L   G D T++FE + HS  A++M++ Y +GE+                      +   P K+  TP +    N           KTS    +RL +F +P    ++GL VG  I+  ++   +LC
Sbjct:  517 SKTYTMSEVRRHNNADSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-HSDKAKQMLEDYRIGELTTTCYNSDSSSSNPSVHGSSDTIPLTPIKEVITPMRSVALNPREKIPCKLISKTSISHDVRLFRFALPSDDLLMGLPVGKHIFLCATVDEKLC 684          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA_CHLVU (Nitrate reductase [NADH] (Fragment) OS=Chlorella vulgaris PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.444e-16
Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 3
Query:   24 AKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI 251
            AK FT+AEV  H  M+  W +++GKVYD T FL+DHPGG + +L   G DATD+F  + HS  A++ + +YY+GE+
Sbjct:  216 AKSFTMAEVETHTTMESAWFVVDGKVYDATPFLKDHPGGADSILLVAGIDATDEFNAI-HSLKAKKQLLEYYIGEL 290          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.169e-16
Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   24 AKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI------DVSTIPKKK---------------EYTP----------PKQPHYNQDKTS-EFIIRLLQFLVPL--AILGLAVGIRIYTKSS*CSRLC 431
            AK+++++EV  HN+   CW+I++G +YD T+FL DHPGG + +L   G D T++FE + HS  A++M++ Y +GE+        S+ P                  E TP           K P    +KTS    +R  +F +P+   +LGL VG  I+  ++   +LC
Sbjct:  542 AKMYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKMLEDYRIGELITTGYSSDSSSPNNSVHGSSAVFSLLAPIGEATPVRNLALVNPRAKVPVQLVEKTSISHDVRKFRFALPVEDMVLGLPVGKHIFLCATINDKLC 710          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.288e-16
Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 3
Query:   24 AKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI---------------------DVSTIPKKKEYTP---------PKQPHYNQDKTS-EFIIRLLQFLVPL--AILGLAVGIRIYTKSS*CSRLC 431
            +K +T++EV  HNN    W+I++G VYD T+FL+DHPGG + +L   G D T++FE + HS  A++M++ Y +GE+                      +   P K+  TP          K P     KTS    +RL +F +P    ++GLAVG  I+   +   +LC
Sbjct:  513 SKTYTMSEVRRHNNADSAWIIVHGHVYDWTRFLKDHPGGTDRILINAGTDCTEEFEAI-HSDKAKQMLEDYRIGELTTTCYNSDSSSSNPSVHGRSDTIPLTPIKEVITPMRSVALIPREKIPCKLISKTSISHDVRLFRFGLPSDGLLMGLAVGKHIFLCVTVDEKLC 680          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.584e-15
Identity = 52/167 (31.14%), Postives = 87/167 (52.10%), Query Frame = 3
Query:   24 AKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI------------------DVSTIPKKKEYTPPKQ----------PHYNQDKTS-EFIIRLLQFLVPL--AILGLAVGIRIYTKSS*CSRLC 431
            AK+++++EV  HN+++  W+I++G +YD T+FL+DHPGG + +L   G D T++FE + HS  A+++++ Y +GE+                   VS +   KE  P K           P    +KTS    +R  +F +P     LGL VG  I+  ++   +LC
Sbjct:  539 AKMYSMSEVRKHNSVESAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGELITTGYDSSPNVSVHGGSTAVSLLAPIKELAPSKNIALVNPREKVPVTLIEKTSISHDVRRFRFALPSEDQQLGLPVGKHIFLCANINDKLC 704          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.529e-15
Identity = 38/97 (39.18%), Postives = 62/97 (63.92%), Query Frame = 3
Query:   27 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQD 317
            K+++L+EV  HN+    W+I++G VYD T+FL+DHPGG + +L   G D T++FE + HS  A++M++ Y VGE+ ++T       +P    H N +
Sbjct:  522 KMYSLSEVKKHNSPDSAWIIVHGHVYDCTRFLKDHPGGADSILINAGTDCTEEFEAI-HSDKAKKMLEDYRVGEL-ITTGYTSDSSSPNNSLHGNSE 616          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.610e-15
Identity = 42/128 (32.81%), Postives = 73/128 (57.03%), Query Frame = 3
Query:   24 AKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQDKTSEFIIRLLQFLVPLAILGLAVGIRIYTK 407
            +K+F+++EV  HN+ +  W+I++G +YD T FL+DHPGG + +L   G D T++F+ + HS  A++M++ Y +GE+    I        P    +    TS   +  ++ + PL  + L  G +I TK
Sbjct:  528 SKMFSMSEVKKHNSAESAWIIVHGHIYDCTHFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL----ITTGYVSDSPNSTVHGASNTSH--LAPIKEIAPLRNVALIPGAKIPTK 648          
BLAST of GO242676 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.020e-15
Identity = 39/104 (37.50%), Postives = 67/104 (64.42%), Query Frame = 3
Query:   24 AKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQDKTSEFI 335
            +K+F+++EV  H++    W+I++G VYD T+FL+DHPGG + +L   G D T++F+ + HS  A++M++ Y +GE+ ++T     + +P    H N    SEFI
Sbjct:  513 SKMFSVSEVKKHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL-ITTGYTSADSSPNNSVHGN----SEFI 610          
The following BLAST results are available for this feature:
BLAST of GO242676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
NIA_VOLCA8.401e-1741.05Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
NIA1_PHAVU1.097e-1633.54Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA2_SOYBN1.433e-1631.36Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
NIA_CHLVU2.444e-1648.68Nitrate reductase [NADH] (Fragment) OS=Chlorella v... [more]
NIA2_ARATH4.169e-1631.76Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
NIA1_SOYBN9.288e-1632.54Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]
NIA2_BRANA1.584e-1531.14Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA_LOTJA3.529e-1539.18Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA_BETVE4.610e-1532.81Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA2_PHAVU6.020e-1537.50Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]

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Properties
Property NameValue
Genbank description1324 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1515 5, mRNA sequence.