GO242392

Overview
NameGO242392
Unique NameGO242392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKVN 385
            I+C QV   ++PC+SY   G     ACC G+R+LN+A+ TT DRRT CNC+K  A  I GLN     ++P  C    PY ++  +DCS VN
Sbjct:   27 ISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 117          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17
Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKV 382
            ITC QV+  L PCI Y   GGAV PACC+GIR +N  ++TT DR+  CNC+K+ +A +PG+N +    LP  C    PY+++   +C+ V
Sbjct:   27 ITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANV 116          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.270e-17
Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKVN 385
            ITC QV   + PC++Y   G     ACC G+R+L AA+ TT DRRT CNC+K  A  I GLN     ++P  C    PY ++  +DCS+V+
Sbjct:   26 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 116          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.270e-17
Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKVN 385
            ITC QV   + PC++Y   G     ACC G+R+L AA+ TT DRRT CNC+K  A  I GLN     ++P  C    PY ++  +DCS+V+
Sbjct:   26 ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS 116          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.873e-17
Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKV 382
            ITC QV+  L PCI+Y   GG V   CC+G+R+LN A+KTT DR+  CNC+K     I GLN +    LP  C    PYK++   DC  V
Sbjct:    1 ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSV 90          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISYGVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKVN 385
            ITC  V+  L PCI Y + GG +   CC GI+ALNAA+ TT DR+T CNC+K  A  I G+NY +   LP +C    PY ++   +C+ V+
Sbjct:   28 ITCGMVSSKLAPCIGY-LKGGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAVH 117          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISYGV-LGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKVN 385
            I+C QV   + PCISY    G      CC G+R+LN A++TT DRR  CNC+K  AA + GLN     ++P  C    PY ++   DCS+VN
Sbjct:   29 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN 120          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.510e-16
Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISYGVLGGAVQPACCD-GIRALNAASKTTEDRRTQCNC-VKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKVN 385
            I+C QV+  + PC++Y    GA   A C  G+R+LNAA++TT DRR  CNC +K  A+R+ GLN  + +++P  C  + PY ++  +DCS+VN
Sbjct:    2 ISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRVN 94          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.278e-16
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISY--GVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKV 382
            +T  QVT  L PCI+Y  G   GAV P CC GI++LN+A++TT  R+  C C+K  AA I G+N+   + LP  C    PYK++   DC+ V
Sbjct:   28 VTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSV 119          
BLAST of GO242392 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.278e-16
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 2
Query:  113 ITCEQVTIWLTPCISY--GVLGGAVQPACCDGIRALNAASKTTEDRRTQCNCVKEGAARIPGLNYDRVNTLPDICRSKCPYKLTHDLDCSKV 382
            +T  QVT  L PCI+Y  G   GAV P CC GI++LN+A++TT  R+  C C+K  AA I G+N+   + LP  C    PYK++   DC+ V
Sbjct:   24 VTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSV 115          
The following BLAST results are available for this feature:
BLAST of GO242392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
NLT2B_ORYSJ4.575e-1845.05Non-specific lipid-transfer protein 2B OS=Oryza sa... [more]
NLTP1_PRUDU1.019e-1745.56Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP1_ORYSJ2.270e-1743.96Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
NLTP1_ORYSI2.270e-1743.96Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
LTP1_MORNI3.873e-1746.67Non-specific lipid-transfer protein 1 OS=Morus nig... [more]
NLTP_SPIOL8.628e-1745.05Non-specific lipid-transfer protein OS=Spinacia ol... [more]
NLTP_MAIZE1.472e-1643.48Non-specific lipid-transfer protein OS=Zea mays PE... [more]
NLTP_ELECO2.510e-1643.01Non-specific lipid-transfer protein OS=Eleusine co... [more]
NLTP2_GOSHI3.278e-1644.57Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP1_GOSHI3.278e-1644.57Non-specific lipid-transfer protein OS=Gossypium h... [more]

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Properties
Property NameValue
Genbank description1040 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1200 5, mRNA sequence.