GO242300

Overview
NameGO242300
Unique NameGO242300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.951e-22
Identity = 82/263 (31.18%), Postives = 125/263 (47.53%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFL--ASFLLGWGI---TIGAGLASYPIDTVRRRMM-MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T+ AP++R+K+++Q       N         I   F + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+L   +  + G ++ F                F+Y ++  +TRLA     AK G   Q++G+    KK LK +G    Y+G+  + +GII Y G+   +Y+ LK   L +  +DS       LL  G    T G  LASYP+  VR RM    + E     S +  FQ I+  EG   L++G   N ++
Sbjct:  210 TSTAPLDRLKVMMQVHGSKSMN---------IFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGTFERFISGSMAGATAQT----FIYPMEVLKTRLA----VAKTG---QYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLSCGALSSTCGQ-LASYPLALVRTRMQAQATVEGAPQLSMVGLFQRIVSKEGVSGLYRGITPNFMK 451          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.951e-22
Identity = 81/263 (30.80%), Postives = 130/263 (49.43%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFL--ASFLLGWGI---TIGAGLASYPIDTVRRRMMMTSG-EAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T+ AP++R+K+++Q      K+ +++     I   F + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+L   +  + G ++ F                F+Y ++  +TRLA        G   Q++G+ D  KK LK +G+   Y+G+  + +GII Y G+   +Y+ LK   L +  +DS       LLG G    T G  LASYP+  VR RM   +  E     + +  F+ II  EG   L++G   N ++
Sbjct:  210 TSTAPLDRLKIMMQVHGS--KSDKMN-----IFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFISGSMAGATAQT----FIYPMEVMKTRLA-------VGKTGQYSGIYDCAKKILKHEGLGAFYKGYVPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQ-LASYPLALVRTRMQAQAMLEGSPQLNMVGLFRRIISKEGIPGLYRGITPNFMK 453          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.951e-22
Identity = 78/265 (29.43%), Postives = 126/265 (47.55%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFA---RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLL----GWGITIGAGLASYPIDTVRRRMM-MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  AP++R+K+++Q            H  KG S+      + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+LF  +  + G  + F                 +Y ++  +TRLA        G   Q++G+ D  KK ++ +GI   Y+G+  + +GII Y G+   +Y++LK   L +  +DS     L+    G   +    LASYP+  +R RM    S E     +    F++I+  EG   L++G G N L+
Sbjct:  210 TGTAPLDRLKVMMQ-----------VHGSKGNSNIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFVAGSLAGATAQTS----IYPMEVLKTRLA-------VGRTGQYSGMFDCAKKIMQKEGIRAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNHAKDSANPGVLVLLGCGTASSTCGQLASYPLALIRTRMQAQASIEGAPQLNMGGLFRKIVAKEGFLGLYRGIGPNFLK 452          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.150e-21
Identity = 79/263 (30.04%), Postives = 125/263 (47.53%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLAS--FLLGWGI---TIGAGLASYPIDTVRRRMMMTSG-EAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T+ AP++R+K+++Q       N         I   F + +K+ G+ SLWRGN  NVI+  P  A+ F   + +K+L   +  + G ++ F                F+Y ++  +TRLA        G   Q++G+ D  KK LK +G    Y+G+  + +GII Y G+   +Y+ LK   L +  +DS       LLG G    T G  LASYP+  VR RM   +  E     + +  F+ II  EG   L++G   N ++
Sbjct:  210 TSTAPLDRLKVMMQVHGSKSMN---------IFGGFRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTEEGQKIGTFERFISGSMAGATAQT----FIYPMEVMKTRLA-------VGKTGQYSGIYDCAKKILKYEGFGAFYKGYVPNLLGIIPYAGIDLAVYELLKSHWLDNFAKDSVNPGVLVLLGCGALSSTCGQ-LASYPLALVRTRMQAQAMLEGAPQLNMVGLFRRIISKEGLPGLYRGITPNFMK 451          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.150e-21
Identity = 76/257 (29.57%), Postives = 114/257 (44.36%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVL--TDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGT-KSLFKGAGAN 763
            TA AP++R K++ Q     + + R S   K       RT  +EG LSLWRGN+A ++R  P  A+ F   + +K+L        G                       Y LD  R R+A   K         ++ +I V+ +  + +G+  LYRGF+ + +G+I Y G+ F  Y++LK +    +   Q       L G    +    ASYP+D VRRRM         Y S +   QEI+  EG  + L+KG   N
Sbjct:   52 TAVAPLDRTKIIFQ-----VSSNRFSA--KEAYRLIYRTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGSYYGFQGSALTPIPRLLAGALAGTTATIITYPLDLVRARMAVTPK-------EMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKKLHAEHSGRTQPYPFERLLFGACAGLFGQSASYPLDVVRRRMQTAGVTGHAYGSIIGTMQEIVAEEGVIRGLYKGLSMN 294          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.502e-21
Identity = 80/263 (30.42%), Postives = 130/263 (49.43%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFL--ASFLLGWGI---TIGAGLASYPIDTVRRRMMMTSG-EAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T+ AP++R+K+++Q      K+ +++     I   F + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+L   +  + G ++ F                F+Y ++  +TRLA        G   Q++G+ D  KK LK +G+   Y+G+  + +GII Y G+   +Y+ LK   L +  +DS       LLG G    T G  LASYP+  VR RM   +  E     + +  F+ I+  EG   L++G   N ++
Sbjct:  210 TSTAPLDRLKVMMQVHGS--KSAKMN-----IYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFVSGSMAGATAQT----FIYPMEVLKTRLA-------VGKTGQYSGMFDCAKKILKYEGMGAFYKGYVPNLLGIIPYAGIDLAVYELLKSHWLDNFAKDSVNPGVMVLLGCGALSSTCGQ-LASYPLALVRTRMQAQAMIEKSPQLNMVGLFRRILSKEGLPGLYRGITPNFMK 453          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: S2542_XENLA (Solute carrier family 25 member 42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.345e-21
Identity = 74/257 (28.79%), Postives = 114/257 (44.36%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVL--TDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEG-TKSLFKGAGAN 763
            TA AP++R K++ Q     + + R S   K       RT  ++G LSLWRGN+A ++R  P  A+ F   + +K+L        G                       Y LD  R R+A   K         ++ +I V+ +  + +G+  LYRGF+ + +G+I Y G+ F  Y++LK +    +   Q       L G    +    +SYP+D VRRRM         Y S +   QEI+  EG  + L+KG   N
Sbjct:   52 TAVAPLDRTKIIFQ-----VSSNRFSA--KEAYRLIYRTYMNDGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGSYYGFQGSALTPIPRLLAGALAGTTATLLTYPLDLVRARMAVTQK-------EMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKKLHAEHSGRTQPYTFERLLFGACAGLFGQSSSYPLDVVRRRMQTAGVTGHTYGSIIGTMQEIVAEEGFIRGLYKGLSMN 294          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.706e-21
Identity = 77/266 (28.95%), Postives = 122/266 (45.86%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCF----ARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVL----TDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMM-MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  AP++R+K+L+Q            H  +G S C      + +K+ G+ SLWRGN  NVI+  P  AL F   +  KR+    ++  G  + F                 +Y ++  +TRLA      +K G  Q+ G+ D  K  LK++G++  Y+G+  + +GII Y G+   +Y++LK   L    T+            G   +    LASYP+  +R RM    S E     S    F++I+K EG   L++G   N L+
Sbjct:  202 TCTAPLDRLKVLMQ-----------VHGCQGKSMCLMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKRVMGSSQETLGISERFVAGSLAGVIAQST----IYPMEVLKTRLA-----LRKTG--QYKGISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGTENADPGVFVLLACGTVSSTCGQLASYPLALIRTRMQAQASVEGSSQVSMTGLFKQIMKTEGPTGLYRGLTPNFLK 445          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.452e-21
Identity = 69/255 (27.06%), Postives = 112/255 (43.92%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG---YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMM--TSGEAVKYKSSLHAFQEIIKNEGTKSLFKG 751
            T  +P+ER+K+L Q     ++     +  +GI          EG +  ++GN  NVIR  P  A+ F   + +K       D+     Y   F G                Y LD  R+RL       K      +NG+ D  K  ++ +G+AGLY+G   S +G+  Y  + F  Y++LK   +      + + S   G      A   +YPID +RRR+ +    G+ + Y  +  AF++II++EG   L+ G
Sbjct:  154 TCTSPLERLKILNQVGHMNLEQNAPKYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLLNNNDQTHLTTYENLFVGGAAGVTSLLC-----TYPLDLIRSRLTVQVFGNK------YNGIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTFIPKDTTPTVVQSLTFGAISGATAQTLTYPIDLIRRRLQVQGIGGKDILYNGTFDAFRKIIRDEGVLGLYNG 397          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.271e-20
Identity = 75/265 (28.30%), Postives = 122/265 (46.04%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFA---RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVL----TDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMM-MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  AP++R+K+++Q            H  KG ++      + VK+ GI SLWRGN  NVI+  P  A+ F   + +K+LF  +  + G  + F                 +Y ++  +TRLA        G   Q++G+ D  KK ++ +G+   Y+G+  + +GII Y G+   +Y++LK   L    TD      L     G   +    LASYP+  +R RM    S E     +    F++I+  EG   L++G   N L+
Sbjct:  210 TGTAPLDRLKVMMQ-----------VHGSKGNANIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFIAGSLAGATAQTS----IYPMEVLKTRLA-------VGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSANPGVLVLLGCGTASSTCGQLASYPLALIRTRMQAQASIEGAPQLNMGGLFRKIVAKEGFFGLYRGIAPNFLK 452          
The following BLAST results are available for this feature:
BLAST of GO242300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
SCMC1_MOUSE3.951e-2231.18Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_HUMAN3.951e-2230.80Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM1B_XENLA3.951e-2229.43Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_RABIT1.150e-2130.04Calcium-binding mitochondrial carrier protein SCaM... [more]
S2542_XENTR1.150e-2129.57Solute carrier family 25 member 42 OS=Xenopus trop... [more]
SCMC1_BOVIN1.502e-2130.42Calcium-binding mitochondrial carrier protein SCaM... [more]
S2542_XENLA3.345e-2128.79Solute carrier family 25 member 42 OS=Xenopus laev... [more]
SCM2A_DANRE5.706e-2128.95Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFB_DICDI7.452e-2127.06Mitochondrial substrate carrier family protein B O... [more]
SCMC1_XENTR1.271e-2028.30Calcium-binding mitochondrial carrier protein SCaM... [more]

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Properties
Property NameValue
Genbank description948 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone T1097 5, mRNA sequence.