GO242300

Overview
NameGO242300
Unique NameGO242300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: TPC1_YARLI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Yarrowia lipolytica GN=TPC1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.232e-16
Identity = 79/282 (28.01%), Postives = 122/282 (43.26%), Query Frame = 2
Query:   11 APIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFV--YSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVV-LTDGMQDSFLASFLL---GW-GITIG--AGLAS----YPIDTVRRRMMMTSGEAVKYK------------SSLHAF---QEIIKNEGTKSLFKGAGANILR 772
            AP++ VK+ +Q Q    K+G  S  Y+GI     + V+DEG+ +LW+GN    + Y    A  F    +  ++ N   +    WK  +G               +  Y  D  RT  A  A+ AK    + +  L   +K   K++G  G +RG S S + I  Y GL+F  Y  +K  +          L S+ L   GW   T G  AG AS    +P+DT+R+R+       V YK             S + F   + II  EG + L+KG   ++++
Sbjct:   32 APLDVVKIRLQLQ----KDG--SRYYRGIFQTMQQIVRDEGVTALWKGNIPAELLYVFYGATQFVTYHHVNQVINAYNETAEKWKISSGAQSFIAGATAGAGATIATYPFDLFRTLFA--AQGAKNCNVKNYTSLFQTFKLIYKTEGPLGFFRGVSSSIISIAPYMGLFFASYGRVKDSLDAFSNKHHDLLVSYNLPTKGWQEATAGLCAGTASKALVFPLDTIRKRLQTQGRMDVSYKELSGKPGVQRLLDSYNPFVMARRIIVAEGCRGLYKGFLVSLIK 305          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 5.527e-16
Identity = 72/262 (27.48%), Postives = 116/262 (44.27%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDS----FLASFLLGWGITIGAGLASYPIDTVRRRMM-MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  AP++R+K+ +Q      K  RL+     I       V + GI SLWRGN  NV++  P  A+ F   +  KR    +++     + F                 +Y ++  +TRL       ++ G  Q+ GL+D  ++ L+ +G    YRG+  + +GII Y G+   +Y++LK   L     DS     L     G   +    +ASYP+  VR RM    S E     S L   + I+  EG + L++G   N ++
Sbjct:  201 TGTAPLDRLKVFMQVHAS--KTNRLN-----ILGGLRSMVLEGGIRSLWRGNGINVLKIAPESAIKFMAYEQIKRAILGQQETLHVQERFVAGSLAGATAQT----IIYPMEVLKTRLT-----LRRTG--QYKGLLDCARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNWWLQQYSHDSADPGILVLLACGTISSTCGQIASYPLALVRTRMQAQASIEGGPQLSMLGLLRHILSQEGMRGLYRGIAPNFMK 444          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: TPC_MOUSE (Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus GN=Slc25a19 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.743e-15
Identity = 63/267 (23.60%), Postives = 121/267 (45.32%), Query Frame = 2
Query:   11 APIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNF-AFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKP----VVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMM--------TSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            +P++ +K+  Q Q E +     +  Y GI     + +++EG  + W+G+    I      A+ F AF++  + L+     +      F+ +              V+ +D  RTRLA       +G  + +N L +  +   K++G    Y+G + + + I  Y GL F  Y SLK     ++  DG Q   L + L G G  + +   +YP+D +++R+ +          G+   Y+  L   Q++++ EGT+  FKG   ++++
Sbjct:   34 SPLDVIKIRFQLQIERLCPSDPNAKYHGIFQAAKQILQEEGPRAFWKGHVPAQILSIGYGAVQFLAFEELTELLYQANLYQTHQ---FSAHFVCGGLSAGTATLTVHPVDVLRTRLA------AQGEPKIYNNLREAIRTMYKTEGPFVFYKGLTPTVIAIFPYAGLQFSCYRSLKRAYDWLIPPDGKQTGNLKNLLCGCGSGVISKTFTYPLDLIKKRLQVGGFEHARSAFGQVRSYRGLLDLTQQVLQEEGTRGFFKGLSPSLMK 291          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.743e-15
Identity = 78/284 (27.46%), Postives = 121/284 (42.61%), Query Frame = 2
Query:   11 APIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLA---------NDAKAAKKGGERQ-----FNGLIDV-YKKTLKSDG------IAGLYRGFSISCVGIIVYRGLYFGMYDSLK---PVVLTDGMQDSFLASFLLGWGITIGAG-LASYPIDTVRRRMMMT---SGEAVK--YKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            AP+ERVK+L Q + +M       + +  +       +K+EG+  LW+GNTA ++R FP  A+ +   DY K   NF  D+    + F                  Y LD  R RLA         N   +       Q      NG+  V  +K++  +G        G++RG   +  G I Y G+ +  ++  K   P    +   D      L+  G+  G G  A+YP+D VRRR+  T    G+ V+    S+L     I + EG  +LFKG   N ++
Sbjct:   30 APLERVKILYQVKSKM-------YSFNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKN--NFVTDKKSSVQIFIAG----SLGFSCAILLTYPLDVIRARLALSYSNNNNNNSINSKNLNSSTQPPKVLKNGIGAVNIEKSIDFNGYKTKGLFKGIWRGILPTLYGSIPYAGVGYSSFEYFKRIAPDSFRNEKGDVIGIYKLISGGVAGGLGQTAAYPLDVVRRRIQTTGYGDGKGVENLKHSTLKTMFTIFQKEGIYALFKGISINYIK 300          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: S2543_DANRE (Solute carrier family 25 member 43 OS=Danio rerio GN=slc25a43 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.582e-15
Identity = 67/270 (24.81%), Postives = 122/270 (45.19%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG---YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLA---SYPIDTVRRRMMMTS-------GEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  +P+E VK+L Q            H  +G    F    ++EG+ + W+GN  + +R FP  A++ A    +K + N   D  G    W+                    Y L+   TRL      A+   E  + GL+       +++G+  LYRGFS++ +G + +    + +Y +L  +     ++ + L +F+ G    + AG+A   S+P +TV+++M   S       G  V +      F+++IKN+G  +L+ G  AN+++
Sbjct:   28 TVTSPLEVVKILSQVGT--------FHCKRGFLHSFVLICQNEGLRAFWKGNMVSCLRLFPYSAIHLAT---YKNIVNLHIDELGDISQWRAIVAGGLAGISAALA----TYPLEVVETRLI-----AQNCQEPTYRGLLHSLSVIYRNEGLQALYRGFSLTVLGAVPFSVGCYAVYINLDKLWQERHVRFTSLQNFING---CLAAGVAQTLSFPFETVKKKMQAQSLVLPHCGGVDVHFNGMADCFRQVIKNKGVMALWSGLTANMVK 274          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.678e-15
Identity = 80/286 (27.97%), Postives = 115/286 (40.21%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYK--GISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLK-------PVVLTDGMQDS-------FLASFLLGWGITIGAGLASYPIDTVRRRMM-----------MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  AP++RVK+L+Q  +         H Y+  G+        K EG L L++GN A +IR FP  A+ F   +++K L   K    G+  +  AG+               Y LD  R RLA   K     GE  + G+I  +K    K  G  G YRG   + +G+  Y G+ F  + +LK       P +L     D+          + L G      A   SYP D  RRRM            +T  E +KY    H  +        K L++G   N +R
Sbjct:   50 TTVAPLDRVKVLLQAHN---------HHYRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDVTRRRMQLGAVLPEFEKCLTMRETMKYVYGHHGIR--------KGLYRGLSLNYIR 308          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 6.110e-15
Identity = 80/286 (27.97%), Postives = 115/286 (40.21%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYK--GISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTD-----GMQDS---------FLASFLLGWGITIGAGLASYPIDTVRRRMM-----------MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  AP++RVK+L+Q  +         H YK  G+        + EG L L++GN A +IR FP  A+ F   +++K L   K    G+  +  AG+               Y LD  R RLA   K     GE  + G+I  +K    K  G  G YRG   + +G+  Y G+ F  + +LK V L+      G   S            + L G      A   SYP D  RRRM            +T  + +KY    H  +        K L++G   N +R
Sbjct:   52 TTVAPLDRVKVLLQAHN---------HHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRMQLGTVLPEFEKCLTMRDTMKYVYGHHGIR--------KGLYRGLSLNYIR 310          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: TPC1_PHANO (Mitochondrial thiamine pyrophosphate carrier 1 OS=Phaeosphaeria nodorum GN=TPC1 PE=3 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 3.032e-14
Identity = 65/273 (23.81%), Postives = 113/273 (41.39%), Query Frame = 2
Query:   11 APIERVKLLIQNQDEMIKN-----GRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFL------ASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVK--------YKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            AP++ +K+ +Q Q   +       G     YKG      + ++DEG+  LW+GN    + Y    ++ F+      ++ +            A +               Y LD  RTR A       +G +R +  ++   K   + +G  G +RG       I+ Y GL+F  Y+SLKPV     M DS L      +  + G   ++ +  A YP+DT R+R+ +      +        Y   L   Q I K+EG + +++G   ++L+
Sbjct:   33 APLDVIKIRLQLQIHSLSEPTSYRGLNGPVYKGTLGTLKQILRDEGVTGLWKGNIPAELLYLTYGSVQFSAYTNISQMLD-TIPAPYTLPSSANSFISGAGAGAAATTVTYPLDLLRTRFA------AQGKDRVYTSIVASLKSIAQHEGPTGFFRGLGAGVSQIVPYMGLFFASYESLKPV-----MADSPLPLPLGSSDAVAGVVASVVSKTAVYPLDTTRKRLQVQGPNRARYVHRNIPTYSGVLMTLQHIWKHEGRRGMYRGLTVSLLK 293          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.032e-14
Identity = 76/284 (26.76%), Postives = 114/284 (40.14%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLK-------PVVLTDGMQDS-------FLASFLLGWGITIGAGLASYPIDTVRRRMM-----------MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  AP++RVK+L+Q  +   K       + G+        + EG L L++GN A +IR FP  A+ F   +++K     K    G+  +  AG+               Y LD  R RLA   K     GE  ++G+I  +K    K  G  G YRG   + +G+  Y G+ F  + +LK       P +L     D+          + L G      A   SYP D  RRRM            +T  E +KY    H  +        + L++G   N +R
Sbjct:   52 TTVAPLDRVKVLLQAHNRHYK-------HLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDVVRVRLAFQVK-----GEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPALLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDVTRRRMQLGAVLPEFEKCLTMRETMKYVYGQHGIR--------RGLYRGLSLNYIR 310          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: CMC3_CAEEL (Probable calcium-binding mitochondrial carrier F17E5.2 OS=Caenorhabditis elegans GN=F17E5.2 PE=2 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 3.032e-14
Identity = 69/266 (25.94%), Postives = 116/266 (43.61%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKK---DRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPV---VLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMM---MTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T  AP +R+K+ +Q      K  +L     G+  C      + GI S WRGN  NVI+  P  A+ F   D  KR     K   +     +  AG+              +Y ++  +TRL     A ++ G+    G+     K    +GI   Y+G+  + +GII Y G+   +Y+SLK +     T+  +   LA    G   +    LASYP+  VR R+    ++   + +  + +  F+ I++ EG   L++G   N ++
Sbjct:  260 TCTAPFDRIKVYLQVNST--KTNKL-----GVVSCVHLLHAEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKRWMQEYKGGAELSTIERLLAGSSAGAISQTA-----IYPMEVMKTRL-----ALRRTGQLD-KGMFHFAHKMYTKEGIKCFYKGYLPNLLGIIPYAGIDLTVYESLKSMYTKYYTEHTEPGVLALLACGTCSSTCGQLASYPLALVRTRLQARAISPKNSTQPDTMVGQFKHILQTEGFTGLYRGITPNFMK 507          
The following BLAST results are available for this feature:
BLAST of GO242300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
TPC1_YARLI4.232e-1628.01Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
SCMC3_HUMAN5.527e-1627.48Calcium-binding mitochondrial carrier protein SCaM... [more]
TPC_MOUSE2.743e-1523.60Mitochondrial thiamine pyrophosphate carrier OS=Mu... [more]
MCFR_DICDI2.743e-1527.46Mitochondrial substrate carrier family protein R O... [more]
S2543_DANRE3.582e-1524.81Solute carrier family 25 member 43 OS=Danio rerio ... [more]
GDC_BOVIN4.678e-1527.97Graves disease carrier protein OS=Bos taurus GN=SL... [more]
GDC_HUMAN6.110e-1527.97Graves disease carrier protein OS=Homo sapiens GN=... [more]
TPC1_PHANO3.032e-1423.81Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
GDC_MOUSE3.032e-1426.76Graves disease carrier protein homolog OS=Mus musc... [more]
CMC3_CAEEL3.032e-1425.94Probable calcium-binding mitochondrial carrier F17... [more]

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Properties
Property NameValue
Genbank description948 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone T1097 5, mRNA sequence.