GO242300

Overview
NameGO242300
Unique NameGO242300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: MCAT_HUMAN (Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.274e-12
Identity = 69/258 (26.74%), Postives = 115/258 (44.57%), Query Frame = 2
Query:   14 PIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFN-FKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLAS--FLLGWGIT-IGAGLASYPIDTVRRRMMMTSGEAVKYKSSLH-AFQEIIKNEGTKSLFKGAGANILR 772
            P++ VK+ +Q Q   +        Y G  DCF +T+  EGI  L+RG  A +I   P  A+ F      K+L     +D   Y + FA               F   +     R+    +     GE ++ G +D  KK  +  GI G+Y+G  ++ +  +   G+YF  Y+ LK +   +G + S L++   L+  GI  I     + P D ++ R    +    KY +      +E+I++EG  SL+KG  A ++R
Sbjct:   30 PLDTVKVRLQTQPPSLPGQ--PPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGV--------FTTGIMTPGERIKCLLQIQASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQ--TAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIR 275          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: AGC1_ASHGO (Mitochondrial aspartate-glutamate transporter AGC1 OS=Ashbya gossypii GN=AGC1 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.274e-12
Identity = 67/262 (25.57%), Postives = 103/262 (39.31%), Query Frame = 2
Query:   14 PIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLA-------SYPIDTVRRRMMM--TSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            PI+ VK  +Q Q +  K       YK   DC  + +  EG+  L+ G    +I   P +A+     D+ +        RDG                     F   L+  + RL   +           N +       +K+ G+ GLYRG     +  I +  +YF  Y  +K  V     +DS   + L  W + +  GLA       + P D ++ R+ +    GE+V Y     A + I+K EG KS FKG  A +LR
Sbjct:  543 PIDMVKTRMQAQRDFSK-------YKNSIDCLLKILSKEGVRGLYSGLGPQLIGVAPEKAIKLTVNDHMRATL---AGRDGKLS-LPCEIISGATAGACQVVFTNPLEIVKIRLQVKSDYVADAARNSVNAI-----SVIKNLGLIGLYRGAGACLLRDIPFSAIYFPTYAHIKSNVFNFDPKDSDKRNKLNTWQLLVSGGLAGMPAAFLTTPFDVIKTRLQIDPKKGESV-YNGIWDAARTILKEEGIKSFFKGGPARVLR 787          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: TPC1_ASPOR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus oryzae GN=tpc1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.664e-12
Identity = 68/271 (25.09%), Postives = 115/271 (42.44%), Query Frame = 2
Query:   11 APIERVKLLIQNQDEMIKNGRLSHP------YKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGI--TIGAGLASYPIDTVRRRMMMTSGEAVK--------YKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            AP++ VK+ +Q Q   + +   SH       YKG        V++EGI  LW+GN    + Y    A+ FA    ++         D Y     A +               Y LD  RTR A       +G ER +  L    +   +++G  G +RG S +   I+ Y GL+F  Y+SL+PV+   G+ D    S     G+  ++ A    +P+D VR+R+ +      K        Y+   +    I++ +G + L++G   ++ +
Sbjct:   33 APLDVVKIRLQLQIHSLSDPT-SHQNIKGPVYKGTLPTIRSIVREEGITGLWKGNIPAELMYVCYGAIQFAA---YRTTTQALSQLDPYRLPPPAESFVAGATAGGLATASTYPLDLLRTRFA------AQGTERVYTSLYASVRDIAQNEGPKGFFRGCSAAVGQIVPYMGLFFATYESLRPVM--SGLHDLPFGSGDAAAGVVASVLAKTGVFPLDLVRKRLQVQGPTRSKYVHRNIPEYQGVYNTMAMIVRTQGMRGLYRGLTVSLFK 291          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: MCFE_DICDI (Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum GN=mcfE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.664e-12
Identity = 74/263 (28.14%), Postives = 115/263 (43.73%), Query Frame = 2
Query:   14 PIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSL-----DYARTRLANDAKAAKKG-GERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVV--LTDGMQDSFL-ASFLLGWGITIGAGLASY--PIDTVRRRM-MMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANI 766
            P++ V+  +Q +    K G+    YKG  +   + +K+EG+  L++G         P  AL F   +Y K+   +  DR G  KW  G               + SL     D  + RL       K    +  + G     K  L+ +GI GLYRGF  +      + G+YF +Y+  K  +  L    +D +L   + LG G   GA  A+   P+D ++ R+ +  S E   YK    +F+ I+K EG K+  KG GA I
Sbjct:   28 PVDTVRARVQIE----KVGKSQ--YKGTFNALNQIIKNEGVSYLYKGFPIVATATVPAHALYFLGYEYSKQ---WVTDRYGK-KW--GESTITHFSAGFVADALGSLIWVPMDIIKQRLQVQTNTQKLNPNQTYYKGSFHAGKIILQEEGIRGLYRGFMPALATYGPFVGIYFSVYEKCKSTISSLLSKEKDQYLPIPYQLGSGFFAGAFAAAVTCPLDVIKTRIQVQRSTEKQIYKGMWDSFKTILKEEGPKAFVKGMGARI 278          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: TPC1_PICGU (Mitochondrial thiamine pyrophosphate carrier 1 OS=Pichia guilliermondii GN=TPC1 PE=3 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 2.173e-12
Identity = 65/257 (25.29%), Postives = 109/257 (42.41%), Query Frame = 2
Query:   11 APIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFV-YSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGL--ASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            AP++ VK+ +Q  ++ +        + G+     R  K+EGI + W+GN    I Y    A  F     F +     +   G+    + +              V Y  D  RTRLA ++       ER F  +  V K+   S G+AGLY G   + + + +  GL F  Y+  + V         F+  F    G   GA     ++P+DT+R+RM M S +     S +   + I++ EG    +KG G ++++
Sbjct:   36 APLDTVKIRLQLSNKSLG------AHDGLRQTVVRIFKNEGIRAFWKGNVPAEIMYILYGATQFTSYSMFSKALTELETTYGFNLRPSNHSLIVGTSAGLTSLIVTYPFDLLRTRLAANS-------ERHFLSMTAVIKQVRASGGLAGLYMGAKPTLLSLGLNSGLMFWTYEIAREVSAQYKDNIPFIEGFC---GFFAGASSKGITFPLDTLRKRMQMRSSKT----SIIGLARTILRREGLFGFYKGFGISLIK 272          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: TPC_BOVIN (Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.838e-12
Identity = 57/266 (21.43%), Postives = 113/266 (42.48%), Query Frame = 2
Query:   11 APIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKP----VVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMM--------TSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            +P++ +K+  Q Q E +     +  Y GI     + +++EG  + W+G+    +      A+ F   +    L +    RD   + F+ +              V+ +D  RTR A       +G  R +  L D      +++G    Y+G + + + I  Y G  F +Y SLK      +  +G ++    + L G G  + +   +YP+D  ++R+ +        + G+   YK  L    ++++ EG +  FKG   ++L+
Sbjct:   34 SPLDVIKIRFQLQIERLSRSDPNAKYHGILQAGRQILQEEGPTAFWKGHIPAQLLSIGYGAVQFLSFEALTELVHRASVRDA--RDFSVHFLCGGLSACVATLAVHPVDVLRTRFA------AQGEPRVYKTLRDAVVTMYRTEGPLVFYKGLNPTLIAIFPYAGFQFSIYSSLKRAYEWALPAEGKKNGNFKNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEQARASFGQVRSYKGLLDCAGQVLREEGAQGCFKGLSPSLLK 291          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: TPC1_NEUCR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Neurospora crassa GN=tpc-1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.841e-12
Identity = 63/258 (24.42%), Postives = 108/258 (41.86%), Query Frame = 2
Query:   32 LLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFN--FKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMM---TSGEAVKYKSSLH------AFQEIIKNEGTKSLFKGAGANILR 772
            LL Q + E+I  G +   YKG        ++ EG+  LW+GN    + Y    A+ F       +     F KD++        +               Y LD  RTR A       +G ER +  L+   K    S+G+ G +RG       II Y G +F +Y++L+P +    +  S   S + G   ++ A   ++P+D VR+R+ +   T G  V     ++          I++ EG + L++G   ++ +
Sbjct:   53 LLHQRRAEIIGGGPV---YKGTLPTIRHILRTEGLTGLWKGNIPAELLYVSYAAVQFTTYRSITQFLQAAFPKDQNKQLPPSVESFIAGASAGGVATAVTYPLDLLRTRFA------AQGVERVYPSLVQALKTIYASEGVTGYFRGLGPGLAQIIPYMGTFFCVYETLRPRLSKLELPYS-SGSAVAGVLASVMAKTGTFPLDLVRKRIQVQGPTRGMYVHKNIPVYDGGMVKTVATIVRREGVRGLYRGLTVSLFK 300          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: ODC_SCHPO (Probable mitochondrial 2-oxodicarboxylate carrier OS=Schizosaccharomyces pombe GN=SPAC328.09 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.323e-12
Identity = 66/240 (27.50%), Postives = 105/240 (43.75%), Query Frame = 2
Query:   86 YKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFN--FK-KDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMY----DSLKPVVLTDG-MQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMT---SGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            Y G  DC  + VK+EG   L+RG    ++   P +AL FA  D + +L+   FK KD         G+              V   +  + RL  D K A K     +NG +D + K +K + I  LY GF  +    +V+   YFG+     +SL P     G ++++ +A  + G    I     S P D ++ R+      +G+  KY  +  A   + + EG  +L+KG    +LR
Sbjct:   45 YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPALSILTGS-----CAGFTETFVVVPFELMKIRL-QDVKNASK-----YNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGG----IFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLR 269          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: AGC1_YEAST (Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae GN=AGC1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.258e-12
Identity = 61/265 (23.02%), Postives = 102/265 (38.49%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYP-------IDTVRRRMMMTSGEA-VKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            T   PI+ +K  +Q Q  + +       YK   DC  + +  EGI  L+ G    +I   P +A+     D+ +   N   D++G    F                F   L+  + RL   +    +  ++       + KK     G+ GLY G +   +  + +  +YF  Y  LK  +      D    + L  W +     +A  P        D ++ R+ +   +   KY    HA + I+K E  +S FKG GA +LR
Sbjct:  546 TVVYPIDFIKTRMQAQRSLAQ-------YKNSIDCLLKIISREGIKGLYSGLGPQLIGVAPEKAIKLTVNDFMR---NRLTDKNGKLSLFP-EIISGASAGACQVIFTNPLEIVKIRLQVQSDYVGENIQQANETATQIVKKL----GLRGLYNGVAACLMRDVPFSAIYFPTYAHLKKDLFDFDPNDKTKRNRLKTWELLTAGAIAGMPAAFLTTPFDVIKTRLQIDPRKGETKYNGIFHAIRTILKEESFRSFFKGGGARVLR 795          
BLAST of GO242300 vs. ExPASy Swiss-Prot
Match: YIKC_SCHPO (Uncharacterized mitochondrial carrier PB17E12.12c OS=Schizosaccharomyces pombe GN=SPAPB17E12.12c PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.079e-11
Identity = 68/271 (25.09%), Postives = 109/271 (40.22%), Query Frame = 2
Query:    2 TAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGG---ERQFNGLIDVYKKTLKSD---------GIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTS--GEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILR 772
            TA +P+ER+K++ Q Q+        +  Y  ++    +    EG++  +RGN  N +R FP  A+ FA  +  K+     K+R                         Y LD ARTRL+ +               N  + V   TL S          G   LY G   + + ++ Y  + F  ++  K    ++    +F   FL G+   IG  L ++P D +RRR  +    G    YK+   A   I K EG    F+G  +N+L+
Sbjct:   36 TAVSPLERMKIIFQVQN--------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ--RALKNRSHQNLENHERLLFGAIAGAASCATTYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQHEGGYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNADLTAFQKLFLGGFTGIIGQTL-TFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295          
The following BLAST results are available for this feature:
BLAST of GO242300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
MCAT_HUMAN1.274e-1226.74Mitochondrial carnitine/acylcarnitine carrier prot... [more]
AGC1_ASHGO1.274e-1225.57Mitochondrial aspartate-glutamate transporter AGC1... [more]
TPC1_ASPOR1.664e-1225.09Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
MCFE_DICDI1.664e-1228.14Mitochondrial substrate carrier family protein E O... [more]
TPC1_PICGU2.173e-1225.29Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC_BOVIN2.838e-1221.43Mitochondrial thiamine pyrophosphate carrier OS=Bo... [more]
TPC1_NEUCR4.841e-1224.42Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
ODC_SCHPO6.323e-1227.50Probable mitochondrial 2-oxodicarboxylate carrier ... [more]
AGC1_YEAST8.258e-1223.02Mitochondrial aspartate-glutamate transporter AGC1... [more]
YIKC_SCHPO1.079e-1125.09Uncharacterized mitochondrial carrier PB17E12.12c ... [more]

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Properties
Property NameValue
Genbank description948 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone T1097 5, mRNA sequence.