GO242267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.368e-12 Identity = 48/129 (37.21%), Postives = 63/129 (48.84%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 313 + GPTTV ++GL PG H +H +G+ +N ISTGP F P G L NI +EG+A I K IPLSG NSV+GR VVH S + + G +A G +GL+ Sbjct: 81 DDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLT 209
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12 Identity = 47/129 (36.43%), Postives = 64/129 (49.61%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIA-TFEIYKTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 313 + SGPTTV ++GL PG H +H +G+ +N ISTGP F P G L NI ++G+A T + IPL+G NSV+GR VVH S + + G +A G IGL+ Sbjct: 86 DDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGLT 214
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12 Identity = 51/129 (39.53%), Postives = 66/129 (51.16%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPA----GAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 313 E +GPTTVK L+GL PG H +H +G+ +N +STG F P GA G L NI S+G+A I IPLSG +SVIGR LVVH S + + G +A G +GL+ Sbjct: 11 EDNGPTTVKVRLTGLTPGKHGFHLHEFGDTTNGCMSTGSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 139
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12 Identity = 46/129 (35.66%), Postives = 63/129 (48.84%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 313 E GPTTV ++GL PG H +H +G+ +N ISTGP F P G G L NI ++G+A I IPL+G N+V+GR VVH S + + G +A G +GL+ Sbjct: 90 EEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLT 218
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 11 GPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP-----AGAD------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 286 GP T+KGS++GL PG H +H +G+ +N IS GP + P G D G L N+ G+A FEI + + LSG S+IGR LVVH D G G Sbjct: 25 GPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEK-EDDLGKG 127
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12 Identity = 50/129 (38.76%), Postives = 63/129 (48.84%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 313 E PTTV ++GL PG H +H YG+ +N ISTGP F P GA G L NI + G+A I IPL+G NSVIGR LVVH S + + G +A G +GL+ Sbjct: 72 ENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLT 200
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11 Identity = 45/108 (41.67%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDGV 289 EGS PTT+ G + GL PG H +H YG+ +N IS GP F P G L NI ++G A +I K + L G NS+IGR LVVH+ D G GV Sbjct: 25 EGS-PTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHAD-QDDLGKGV 130
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.581e-11 Identity = 49/129 (37.98%), Postives = 63/129 (48.84%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 313 E GPTTV ++GL PG H +H YG+ +N ISTG F P GA G L NI +G+A I IPLSG+NSV+GR VVH S + + G +A G +GL+ Sbjct: 86 EDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 214
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11 Identity = 46/129 (35.66%), Postives = 64/129 (49.61%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP------AGAD-----GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 313 + GPTTV ++GL PG H +H YG+ +N +STG F P A D G L NI ++G+A + IPL+G NSV+GR LVVH S + + G +A G +GL+ Sbjct: 87 DDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 215
BLAST of GO242267 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.749e-11 Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = 2 Query: 2 EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHS 259 + +G T VKG ++GL PG H IH G+ +N STGP F P D G L N+ ++G+A + T IPLSG +S++GR +VVH+ Sbjct: 25 DSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHA 122 The following BLAST results are available for this feature:
BLAST of GO242267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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