GO242256

Overview
NameGO242256
Unique NameGO242256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: MATK_RAT (Megakaryocyte-associated tyrosine-protein kinase OS=Rattus norvegicus GN=Matk PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.546e-27
Identity = 69/198 (34.85%), Postives = 111/198 (56.06%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRML 592
            H N+VR +G      ++ IV E+   G++  FL  R    V     ++ AL VA GM Y+     +HRDL + N+L+S D   K++DFG+A+ E++ +G+       +W APE +++  ++ K DV+SFG++LWE+ + G  P+  M+  + + A V KG R   P+ C   +  +M  CW+  P  RPPF +IV  L
Sbjct:  244 HRNLVRLLGVILHHGLY-IVMEHVSKGNLVNFLRTRGRALVSTSQLLQFALHVAEGMEYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKAELR-KGLDSSRLPVKWTAPEALKNGRFSSKSDVWSFGVLLWEVFSYGRAPYPKMSLKEVSEA-VEKGYRMEPPDSCPGPVHTLMGSCWEAEPSRRPPFRKIVEKL 438          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: Y9844_DICDI (Probable serine/threonine-protein kinase DDB_G0282963 OS=Dictyostelium discoideum GN=DDB_G0282963 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 69/205 (33.66%), Postives = 120/205 (58.54%), Query Frame = 2
Query:    8 NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL--GFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLL------PFQNMTAVQAAFAVV----NKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIV 583
            N+++F GAC+++ +  +VTEY + GS+   +++R+   +   L  K       G+  +H +    +HRD+KS NLLI++   +K+ADFG+A+  E+QT   +   GT  + APE+     Y++K DVYS GIVLWE+ T ++      P+++ T +   F +V     +G+RP +P +  P LS ++ +CW+ +P  RP   +I+
Sbjct: 1531 NLIKFYGACKEKKLR-MVTEYCQHGSLYHIMSKRK-MDISWPLVFKWMHQAVDGINSLHTMRPALVHRDIKSQNLLINSQFDLKVADFGLAKPTELQTGSNSTIKGTMAYCAPELYNGISYSEKADVYSLGIVLWEITTRVITGKYQRPYEDNTEISFDFQIVIMSSKQGIRPTMPPNVPPKLSYLIQKCWNQDPNERPSCQQIL 1733          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: LCK_HUMAN (Proto-oncogene tyrosine-protein kinase LCK OS=Homo sapiens GN=LCK PE=1 SV=6)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 71/202 (35.15%), Postives = 111/202 (54.95%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLEN 598
            H  +VR      +  ++ I+TEY + GS+  FL       + +   +  A  +A GMA++    +IHRDL++ N+L+S   S KIADFG+AR+    E    E   +  +W APE I +  +T K DV+SFGI+L E++T G +P+  MT  +     + +G R V P++C   L ++M  CW   PE RP F  +  +LE+
Sbjct:  297 HQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 496          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: EPHA2_HUMAN (Ephrin type-A receptor 2 OS=Homo sapiens GN=EPHA2 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 70/203 (34.48%), Postives = 113/203 (55.67%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLE 595
            H NI+R  G   K     I+TEY + G++ +FL  +      L+L V     +A GM Y+  + ++HRDL + N+L++++   K++DFG++R+ E   E     +G     RW APE I +R +T   DV+SFGIV+WE++T G  P+  ++  +   A +N G R   P DC   + ++M +CW      RP F +IV +L+
Sbjct:  672 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA-INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 872          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: 7TMK1_DICDI (Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum GN=7tmk1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 77/207 (37.20%), Postives = 117/207 (56.52%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQN--RAVPLKLAVKQALDVARGMAYVHGLG---FIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPV---LSEIMTRCWDTNPEVRPPFTEIVRMLE 595
            H N+++F+G C +  +  IVTEY  GGS+ + LT R    +  P+ LA   A+ +ARGM Y+H       +HRDL + N+L+    +I K+ADFG+++   Q   MT   G   + APE+     YT K DVYSFG+++W +ITG  P QN+  ++ A     +  RP +P    P+   L +++  CW  +PE RP F+ I+  LE
Sbjct:  421 HPNVLQFLGVCSETNLNGIVTEYMGGGSLDRLLTDRYFLIKQNPI-LAWNMAISIARGMFYLHDWKPNPILHRDLSTKNILLDESLTIAKVADFGLSK--EQGFEMTSTVGHLCYQAPEVFIGELYTPKADVYSFGLLVWCIITGEQPNQNLQPLKMAHLAAYENYRPPMPQPMDPMWENLGKLIEMCWKKSPEERPSFSFILDFLE 624          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: HCK_HUMAN (Tyrosine-protein kinase HCK OS=Homo sapiens GN=HCK PE=1 SV=5)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 73/205 (35.61%), Postives = 110/205 (53.66%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAET 607
            H  +V+      K  ++ I+TE+   GS+  FL   +    PL   +  +  +A GMA++    +IHRDL++ N+L+SA    KIADFG+AR+    E    E   +  +W APE I    +T K DV+SFGI+L E++T G +P+  M+  +   A + +G R   P +C   L  IM RCW   PE RP F  I  +L++  T
Sbjct:  314 HDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 516          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: FGFR3_PLEWA (Fibroblast growth factor receptor 3 OS=Pleurodeles waltlii GN=FGFR3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 79/228 (34.65%), Postives = 115/228 (50.44%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------------NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMT 619
            H NI+  +GAC +     ++ EYA  G++R++L  R+                 +  K  V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT + DV+SFG++LWE+ T G  P+  +  V+  F ++ +G R   P +C   L  IM  CW   P  RP F ++V  L+   T   T
Sbjct:  520 HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTDDNVMKIADFGLARDVHNIDYYKKTTNGRLP----VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTST 742          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: FGFR3_CHICK (Fibroblast growth factor receptor 3 OS=Gallus gallus GN=FGFR3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 79/228 (34.65%), Postives = 115/228 (50.44%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------------NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMT 619
            H NI+  +GAC +     ++ EYA  G++R++L  R+                 +  K  V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT + DV+SFG++LWE+ T G  P+  +  V+  F ++ +G R   P +C   L  IM  CW   P  RP F ++V  L+   T   T
Sbjct:  529 HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLP----VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHDLYMIMRECWHAVPSQRPTFKQLVEDLDRVLTMTST 751          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: EPHA3_RAT (Ephrin type-A receptor 3 OS=Rattus norvegicus GN=Epha3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 72/203 (35.47%), Postives = 113/203 (55.67%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLE 595
            H NI+R  G   K     IVTEY + GS+  FL +   +   ++L V     +A GM Y+  +G++HRDL + N+LI+++   K++DFG++R+ E   E      G     RW +PE   +R +T   DV+S+GIVLWE+++ G  P+  M+  Q     V++G R  +P DC   L ++M  CW  +   RP F +IV +L+
Sbjct:  680 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPVRWTSPEATAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPLPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 880          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: EPHA3_HUMAN (Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 73/203 (35.96%), Postives = 113/203 (55.67%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLE 595
            H NI+R  G   K     IVTEY + GS+  FL +   +   ++L V     +A GM Y+  +G++HRDL + N+LI+++   K++DFG++R+ E   E      G     RW +PE I +R +T   DV+S+GIVLWE+++ G  P+  M+  Q     V++G R   P DC   L ++M  CW  +   RP F +IV +L+
Sbjct:  679 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 879          
The following BLAST results are available for this feature:
BLAST of GO242256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MATK_RAT1.546e-2734.85Megakaryocyte-associated tyrosine-protein kinase O... [more]
Y9844_DICDI2.019e-2733.66Probable serine/threonine-protein kinase DDB_G0282... [more]
LCK_HUMAN2.019e-2735.15Proto-oncogene tyrosine-protein kinase LCK OS=Homo... [more]
EPHA2_HUMAN2.019e-2734.48Ephrin type-A receptor 2 OS=Homo sapiens GN=EPHA2 ... [more]
7TMK1_DICDI2.019e-2737.20Seven transmembrane domain-containing tyrosine-pro... [more]
HCK_HUMAN2.637e-2735.61Tyrosine-protein kinase HCK OS=Homo sapiens GN=HCK... [more]
FGFR3_PLEWA2.637e-2734.65Fibroblast growth factor receptor 3 OS=Pleurodeles... [more]
FGFR3_CHICK2.637e-2734.65Fibroblast growth factor receptor 3 OS=Gallus gall... [more]
EPHA3_RAT2.637e-2735.47Ephrin type-A receptor 3 OS=Rattus norvegicus GN=E... [more]
EPHA3_HUMAN2.637e-2735.96Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 ... [more]

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Properties
Property NameValue
Genbank description904 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1055 5, mRNA sequence.