GO242252

Overview
NameGO242252
Unique NameGO242252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242252 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.715e-17
Identity = 67/250 (26.80%), Postives = 113/250 (45.20%), Query Frame = 1
Query:    1 GIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSI--NYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAAGGDD-IEYMLKINYYPPCPRPD---LALGVVAHTDLSALTVLVPNEVPGLQV-FKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYK 729
            G+  +L+ +L+     FF LPQ  K     P    +  GYG K +    G   W+++L     P  S       +   P  +R   EEY K ++EV  K+                     D+  +  L++N+YP         + +G   HTD   ++VL  N   GLQ+  KD  W+      ++  I++GD +++++NG++K+V HR   +  ++R+S   F  PP    + PLP LV +++   YK
Sbjct:   61 GVRPELMTRLEQEAIGFFGLPQSLKNRAGPP----EPYGYGNK-RIGPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYFGGPPLSQKIAPLPCLVPEQDDWLYK 305          
BLAST of GO242252 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.078e-15
Identity = 63/248 (25.40%), Postives = 110/248 (44.35%), Query Frame = 1
Query:    1 GIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLF--HRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDK-LFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLA--LGVVAHTDLSALTVLVPNEVPGLQV-FKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 726
            G+  DL+ +L+     FF L    K+    P    D  GYGTK +    G   W++++     +   S      + + P  +R   EEY K M+ +  K L                      + +  L++N+YP      +   +G   HTD   +++L  N+  GLQ+  KD  W+D     ++  + +GD +++++NG++K+V HR   N  ++R+S   F  PP    + PL  LV  ++   Y
Sbjct:   57 GVRPDLLTQLEQEAINFFALHHSLKDKAGPP----DPFGYGTK-RIGPNGDLGWLEYILLNANLCLESHKTTAIFRHTPAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLY 299          
BLAST of GO242252 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.401e-15
Identity = 67/261 (25.67%), Postives = 114/261 (43.68%), Query Frame = 1
Query:    4 IPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYR---FWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAAGGDD-IEYMLKINYYPPCPR--------------PDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDR-WIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYK 729
            +P ++I +L   G EFF     EK    R A      GYG K      G K  +++L      P SI+ R      ++P  +  +  +Y K ++++  ++                     D+  + +L+IN+YPP  +               +  +G   H+D   LT+L  N V GLQ+      WI     P+   + +GD +++L+NG++ +V HR   N  K RMS   F  PP + ++ PL ++V   +P  Y+
Sbjct:   53 VPKEVISRLDEEGIEFFSKNSSEK----RQAGTSTPFGYGCK-NIGPNGDKGELEYLLLHS-NPISISERSKTIAKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTILRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMVTAHSPCLYR 307          
BLAST of GO242252 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11
Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 1
Query:  376 LKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFK--DDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQL 699
            +++  YP  P     LGV  HTD  ALT++  + V GL++     + ++     P ALI ++GD + IL+N +YK+ +HR   N    R + P FL+   D VV PLP L
Sbjct:  259 IRLLRYPSSPN---RLGVQEHTDADALTLMSQDNVKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRVCNNSGSDRYTIPFFLQGNIDYVVAPLPGL 365          
BLAST of GO242252 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  376 LKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV 681
            L++N Y P        G+V HTD S LT+L  +++ GL++  + +WI  K    AL ++IGD  + LSNG Y++V HR     +  RMS   F+ P  +T +
Sbjct:  196 LRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQDQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCPYLETEI 297          
The following BLAST results are available for this feature:
BLAST of GO242252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G2OX2_ARATH5.715e-1726.80Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G2OX3_ARATH1.078e-1525.40Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]
G2OX2_PEA2.401e-1525.67Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]
ISP7_SCHPO2.747e-1136.36Sexual differentiation process protein isp7 OS=Sch... [more]
G2OX7_ARATH3.588e-1136.27Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank description900 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1051 5, mRNA sequence.