GO242188

Overview
NameGO242188
Unique NameGO242188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.592e-38
Identity = 84/141 (59.57%), Postives = 100/141 (70.92%), Query Frame = 1
Query:   49 MSLIPSFFGN--RRSSVSNPFSLD-VWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 462
            MSLIP+ + N  RRS++ +PFSLD +WDPF  F  PS  S    S+   ET+A  NAR+DWKETPEAHVFKADLPG+              L+ISGQR  EKE+KNDTWHRVERSSG F R+FRLPEN K+DQ+KA ME+G
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPF--FGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENG 139          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37
Identity = 84/157 (53.50%), Postives = 99/157 (63.06%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVWDPFRDFPFPSGYSPALS--SQFP----PETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            RRS+V +PFSLD+WDPF  FPF SG S + S    FP     ET+A   AR+DWKETPEAHVFKAD+PGL              LQISG+R  E+E+K D WHRVERSSG F RRFRLP+N K +QIKASME+G                 +I+ISG
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37
Identity = 80/134 (59.70%), Postives = 93/134 (69.40%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVWDPFRDFPFPSGY--SPALSSQFP----PETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 462
            RRS+V +PFSLD+WDPF  FPF SG   S ++   FP     ET+A   AR+DWKETPEAHVFKAD+PGL              LQISG+R  E+E+K D WHRVERSSG F RRFRLPEN K +QIKASME+G
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENG 138          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36
Identity = 85/151 (56.29%), Postives = 96/151 (63.58%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            RRS+V +PFSLD+WDPF D  F S   PA S     +T+A  NAR+DWKETPE+HVFKADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KA ME+G                 AIEISG
Sbjct:    5 RRSNVFDPFSLDLWDPF-DSVFRS-VVPATSDN---DTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.542e-36
Identity = 84/151 (55.63%), Postives = 96/151 (63.58%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            RRS+V +PFSLD+WDPF D  F S   PA S     +T+A  NAR+DWKETPE+HVFKADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KA +E+G                 AIEISG
Sbjct:    5 RRSNVFDPFSLDLWDPF-DSVFRS-VVPATSDN---DTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.336e-36
Identity = 80/151 (52.98%), Postives = 97/151 (64.24%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            RRS+V +PFSLD+WDPF  FPF SG S +L  +   + +A   AR+DWKETPEAHVFKAD+PGL              LQISG+R  E+E+K D WHRVERSSG F RRFRLPEN K +QIKASME+G                 +I+I+G
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSG-SGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.794e-35
Identity = 78/155 (50.32%), Postives = 94/155 (60.65%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPP----ETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            RR +  +PFSLD+WDP   FPF SG S + S    P    + +A   AR+DWKETPE HVFKAD+PGL              LQISG+R  E+E+K+D WHRVERSSG F RRFRLPEN K +QIKASME+G                 +I+ISG
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35
Identity = 85/151 (56.29%), Postives = 96/151 (63.58%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            RRS+V +PF+ D WDPF D  F S   PA S +   +T+A  NARVDWKETPE+HVFKADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KASME+G                 AIEISG
Sbjct:    5 RRSNVFDPFA-DFWDPF-DGVFRS-LVPATSDR---DTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31
Identity = 77/152 (50.66%), Postives = 93/152 (61.18%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVW-DPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            RRS+V +PF+ D+W DPF  F       PA+S     ET+A  NARVDWKETPEAHVFK DLPG+              L +SG+R  EKEDKND WHRVERSSG F RRFRLPE+ K++++KA +E+G                 AIEISG
Sbjct:    5 RRSNVFDPFA-DLWADPFDTF---RSIVPAISGG-SSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 151          
BLAST of GO242188 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.305e-29
Identity = 74/152 (48.68%), Postives = 93/152 (61.18%), Query Frame = 1
Query:   79 RRSSVSNPFSLDVW-DPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            RR++V +PF+ D+W DPF  F       PA+S     ET+A  NAR+DWKETPEAHVFKADLPG+              L +SG+R  EKEDKND WHRVERSSG F RRFRL E+ K++++KA +E+G                 AI+ISG
Sbjct:    5 RRTNVFDPFA-DLWADPFDTF---RSIVPAISGG-GSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG 151          
The following BLAST results are available for this feature:
BLAST of GO242188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
HSP11_CHERU1.592e-3859.5718.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS17A_ORYSJ6.690e-3753.5017.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HS181_ORYSJ8.738e-3759.7018.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16B_ORYSJ1.141e-3656.2916.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS16A_ORYSJ2.542e-3655.6316.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HS174_ORYSJ4.336e-3652.9817.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS177_ORYSJ4.794e-3550.3217.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16C_ORYSJ8.178e-3556.2916.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HS16A_WHEAT2.462e-3150.6616.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16B_WHEAT2.305e-2948.6816.9 kDa class I heat shock protein 2 OS=Triticum ... [more]

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Properties
Property NameValue
Genbank description836 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 983 5, mRNA sequence.