GO242092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_BOVIN (40S ribosomal protein S23 OS=Bos taurus GN=RPS23 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.754e-23 Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKPRS 407 LI G KI +F P DGCLN+I +ND+VL+AGF RKG AVG+ PGVRFKVVKV+ VSLLAL+K KKE+PRS Sbjct: 74 LIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143 HSP 2 Score: 26.9498 bits (58), Expect = 1.754e-23 Identity = 17/44 (38.64%), Postives = 23/44 (52.27%), Query Frame = 1 Query: 64 KKIPPGRGLE-DPFCWLFHCERDCS*GIGIEAY*PGSAIKKCAR 192 KK G L+ +PF H + +G+EA P SAI+KC R Sbjct: 28 KKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVR 71
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_DROME (40S ribosomal protein S23 OS=Drosophila melanogaster GN=RpS23 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.282e-23 Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKPRS 407 LI G KI +F P DG LNYI +ND+VL+AGF RKG AVG+ PGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 74 LIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143 HSP 2 Score: 26.1794 bits (56), Expect = 2.282e-23 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 1 Query: 94 DPFCWLFHCERDCS*GIGIEAY*PGSAIKKCAR 192 +PF H + +G+EA P SAI+KC R Sbjct: 39 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVR 71
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.515e-23 Identity = 47/70 (67.14%), Postives = 57/70 (81.43%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKPRS 407 LI G KI +F P DGCLN+I +ND+VL+AGF RKG AVG+ PGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 74 LIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143 HSP 2 Score: 26.1794 bits (56), Expect = 8.515e-23 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 1 Query: 94 DPFCWLFHCERDCS*GIGIEAY*PGSAIKKCAR 192 +PF H + +G+EA P SAI+KC R Sbjct: 39 NPFGTASHAKGIVLEKVGVEAKQPNSAIRKCVR 71
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_SCHPO (40S ribosomal protein S23 OS=Schizosaccharomyces pombe GN=rps23a PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.108e-22 Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKPRS 407 LI G K+ +F P+DGCLN++ +ND+VL++GF RKG A G+ PGVRFKVVKV+GV L ALF EKKEKPR+ Sbjct: 74 LIKNGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHEKKEKPRA 143 HSP 2 Score: 27.7202 bits (60), Expect = 1.108e-22 Identity = 23/55 (41.82%), Postives = 27/55 (49.09%), Query Frame = 2 Query: 65 KKSLLEGVWKT-PFVGSSIAKGIVLEA---------SVSRHIDRAPLSKNALDLT 199 KK LL +K+ PF GSS AKGIV+E S R R L KN +T Sbjct: 28 KKRLLGTAYKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVT 82
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_CIOIN (40S ribosomal protein S23 OS=Ciona intestinalis GN=RPS23 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.133e-22 Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKPRS 407 LI G KI +F P DGCLNYI +ND+VL+AGF R G AVG+ PGVRFK+VKV+ VSL ALF KKE+PRS Sbjct: 74 LIKNGKKITAFVPNDGCLNYIEENDEVLVAGFGRSGHAVGDIPGVRFKIVKVANVSLHALFTGKKERPRS 143 HSP 2 Score: 26.9498 bits (58), Expect = 4.133e-22 Identity = 18/44 (40.91%), Postives = 23/44 (52.27%), Query Frame = 1 Query: 64 KKIPPGRGLE-DPFCWLFHCERDCS*GIGIEAY*PGSAIKKCAR 192 KK G L+ +PF H + IG+EA P SAI+KC R Sbjct: 28 KKSHLGTALKANPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVR 71
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_CAEEL (40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.377e-22 Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKPRS 407 LI G KI +F P DGCLN++ +ND+VL++GF R G AVG+ PGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 74 LIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143 HSP 2 Score: 26.9498 bits (58), Expect = 5.377e-22 Identity = 15/37 (40.54%), Postives = 19/37 (51.35%), Query Frame = 1 Query: 82 RGLEDPFCWLFHCERDCS*GIGIEAY*PGSAIKKCAR 192 R +PF H + IG+EA P SAI+KC R Sbjct: 35 RWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVR 71
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS12_TETTH (40S ribosomal protein S12 OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.476e-21 Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEK 398 L KIA+F P DGCLN++ +ND+VL+AG R+G AVG+ PGVRFKVV V G+SLLALFK KKEK Sbjct: 75 LRKNSKKIAAFVPMDGCLNFLAENDEVLVAGLGRQGHAVGDIPGVRFKVVCVKGISLLALFKGKKEK 141 HSP 2 Score: 30.4166 bits (67), Expect = 7.476e-21 Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 2 Query: 68 KSLLEGVWKTPFVGSSIAKGIVLE 139 K LL W+ PF+G+S AKG+V E Sbjct: 31 KRLLGSRWRNPFMGASHAKGLVTE 54
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_GILMI (40S ribosomal protein S23 OS=Gillichthys mirabilis GN=rps23 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.620e-20 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKPRS 407 LI G KI +F P DGCLN+ +ND+VL+AGF RK AVG+ PGVRFKVV+++ VSLLAL+K KE+P+S Sbjct: 74 LIKNGKKITAFVPNDGCLNFXEENDEVLVAGFGRKXHAVGDIPGVRFKVVEMANVSLLALYKGXKERPKS 143 HSP 2 Score: 26.5646 bits (57), Expect = 3.620e-20 Identity = 17/44 (38.64%), Postives = 23/44 (52.27%), Query Frame = 1 Query: 64 KKIPPGRGLE-DPFCWLFHCERDCS*GIGIEAY*PGSAIKKCAR 192 KK G L+ +PF H + +G+EA P SAI+KC R Sbjct: 28 KKAHLGTALKANPFGSASHAKGIVLEKVGVEAKQPNSAIRKCVR 71
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_DICDI (40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.281e-19 Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKP 401 L G KI +F P DGCLNYI +NDKVL+AG R G +VG+ PGVRFKVVKVS VSL+A+++ K+KP Sbjct: 74 LKKNGKKITAFVPNDGCLNYIQENDKVLVAGLGRSGHSVGDIPGVRFKVVKVSSVSLIAIYRGIKDKP 141 HSP 2 Score: 26.1794 bits (56), Expect = 2.281e-19 Identity = 18/44 (40.91%), Postives = 22/44 (50.00%), Query Frame = 1 Query: 64 KKIPPGRGLE-DPFCWLFHCERDCS*GIGIEAY*PGSAIKKCAR 192 KK G L+ +PF H +GIEA P SAI+KC R Sbjct: 28 KKAHFGTALKANPFGGASHASGIVVSRLGIEAKQPNSAIRKCVR 71
BLAST of GO242092 vs. ExPASy Swiss-Prot
Match: RS23_ENCCU (40S ribosomal protein S23 OS=Encephalitozoon cuniculi GN=RPS23 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.631e-16 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 3 Query: 198 LINKGNKIASFKPYDGCLNYIGQNDKVLIAGFVRKGFAVGECPGVRFKVVKVSGVSLLALFKEKKEKP 401 LI G KI +F PYDG + YI ND+V + GF +KG +VG+ PG+RFKV KV VSL A+F KKEKP Sbjct: 71 LIATGKKITAFVPYDGSVTYIESNDEVTVEGFGKKGRSVGDIPGIRFKVCKVQNVSLHAIFTGKKEKP 138 HSP 2 Score: 22.7126 bits (47), Expect = 4.631e-16 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 142 IGIEAY*PGSAIKKCAR 192 IG+EA P SAI+K R Sbjct: 52 IGVEAKQPNSAIRKAVR 68 The following BLAST results are available for this feature:
BLAST of GO242092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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