GO242044

Overview
NameGO242044
Unique NameGO242044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: ACA1_ARATH (Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.436e-18
Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1
Query:   10 NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 282
            NT+IFN FV  Q+FNE ++R+ ++I+VF G+ KNY+F+ ++  T V Q+IIIE LG F  T  L+   WL SI +G    P+A   KMIPV
Sbjct:  927 NTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPV 1017          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: ACA11_ARATH (Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.875e-18
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 1
Query:    4 VKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 282
            V NT+IFN+FV  Q+FNE N+R+ ++INVF G+ K+++F+ ++  T   Q+II+EFLG F  TV L W+ WL  I IG  S  LAV  K IPV
Sbjct:  913 VLNTIIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGLKCIPV 1005          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: ACA2_ARATH (Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18
Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 1
Query:   10 NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 282
            NT+IFN FV  Q+FNE ++R+ +EI+VF G+  NY+F+ +IG T   QIIIIEFLG F  T  L    W+ SI IG    P+A   K IPV
Sbjct:  924 NTLIFNCFVFCQVFNEISSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: ACA7_ARATH (Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.455e-18
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 1
Query:    4 VKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 282
            V NT+IFN FV  Q+FNE ++R+ +EI+VF G+  NY+F+ +IG T   QIIIIEFLG F  T  L    W  SI +G    P+A   K IPV
Sbjct:  923 VLNTLIFNCFVFCQVFNEVSSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: ACA3_ORYSJ (Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 1
Query:   10 NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 282
            NT +FN FV  Q+FNE N+R+ ++INVF+G+  +++F  ++G+T   Q+I++E LG F  TV L  KLWL S+ IG     +  + K IPV
Sbjct:  930 NTFVFNTFVFCQVFNEVNSREMEKINVFSGIFSSWIFSAVVGVTAGFQVIMVELLGTFANTVHLSGKLWLTSVLIGSVGLVIGAILKCIPV 1020          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: ACA2_ORYSJ (Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.534e-15
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 1
Query:    4 VKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 282
            V NT+IFN FV  Q+FNE ++R+ ++INV  G+  N +F+G++  T   Q I+++FLG F  T  L  + WL SI  G    P+A   K+I V
Sbjct:  929 VLNTIIFNTFVFCQVFNEISSREMEDINVLRGMAGNSIFLGVLTGTIFFQFILVQFLGDFANTTPLTQQQWLISILFGFLGMPIAAAIKLIAV 1021          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: ATC2_SCHPO (Calcium-transporting ATPase 2 OS=Schizosaccharomyces pombe GN=pmc1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.700e-11
Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 1
Query:   10 NTMIFNAFVLSQIFNEFNARKPD-EINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIP 279
            NT++FN FV  Q+FNE N R+ D ++N+F  +  N+LF+ I  I   +Q+II+ F G      ++D K W  SI  G+ S PL  L + +P
Sbjct: 1050 NTIVFNTFVWLQLFNEINNRRLDNKLNIFERINHNFLFIAIFVIVAGIQVIIVFFGGAAFSVKRIDGKGWAISIVFGVISIPLGALIRCVP 1140          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: AT2B1_RABIT (Plasma membrane calcium-transporting ATPase 1 OS=Oryctolagus cuniculus GN=ATP2B1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.700e-11
Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 1
Query:   13 TMIFNAFVLSQIFNEFNARK-PDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASI--GIGLFSW 249
            T++FN FVL Q+FNE NARK   E NVF G+  N +F  I+  TFV+QIII++F GK     +L  + WL SI  G+G   W
Sbjct:  973 TIVFNIFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFAGKPFSCSELSVEQWLWSIFLGMGTLLW 1054          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: AT2B4_HUMAN (Plasma membrane calcium-transporting ATPase 4 OS=Homo sapiens GN=ATP2B4 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   13 TMIFNAFVLSQIFNEFNARK-PDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGK-FTKT-VKLDWKLWLASIGIGLFSW 249
            T++FN FVL Q+FNE N+RK   E NVF+G+ +N +F  ++  TF+ QI I+EF GK F+ T + L   LW   IGIG   W
Sbjct:  961 TIVFNTFVLMQLFNEINSRKIHGEKNVFSGIYRNIIFCSVVLGTFICQIFIVEFGGKPFSCTSLSLSQWLWCLFIGIGELLW 1042          
BLAST of GO242044 vs. ExPASy Swiss-Prot
Match: AT2B1_RAT (Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11
Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 1
Query:   13 TMIFNAFVLSQIFNEFNARK-PDEINVFTGVTKNYLFMGIIGITFVLQIIIIEFLGKFTKTVKLDWKLWLASI--GIGLFSW 249
            T++FN FVL Q+FNE NARK   E NVF G+  N +F  I+  TFV+QIII++F GK     +L  + WL SI  G+G   W
Sbjct:  973 TIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFSCSELSIEQWLWSIFLGMGTLLW 1054          
The following BLAST results are available for this feature:
BLAST of GO242044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
ACA1_ARATH1.436e-1848.35Calcium-transporting ATPase 1, chloroplastic OS=Ar... [more]
ACA11_ARATH1.875e-1850.54Putative calcium-transporting ATPase 11, plasma me... [more]
ACA2_ARATH2.449e-1850.55Calcium-transporting ATPase 2, plasma membrane-typ... [more]
ACA7_ARATH5.455e-1849.46Putative calcium-transporting ATPase 7, plasma mem... [more]
ACA3_ORYSJ1.215e-1743.96Calcium-transporting ATPase 3, plasma membrane-typ... [more]
ACA2_ORYSJ2.534e-1541.94Calcium-transporting ATPase 2, plasma membrane-typ... [more]
ATC2_SCHPO1.700e-1139.56Calcium-transporting ATPase 2 OS=Schizosaccharomyc... [more]
AT2B1_RABIT1.700e-1148.78Plasma membrane calcium-transporting ATPase 1 OS=O... [more]
AT2B4_HUMAN2.220e-1147.56Plasma membrane calcium-transporting ATPase 4 OS=H... [more]
AT2B1_RAT2.899e-1148.78Plasma membrane calcium-transporting ATPase 1 OS=R... [more]

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Properties
Property NameValue
Genbank description692 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 835 5, mRNA sequence.