GO242002

Overview
NameGO242002
Unique NameGO242002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.109e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 2 
Query:  371 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 598
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 140.198 bits (352), Expect = 1.047e-32
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 2 
Query:  143 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGG 370
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+ RTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 94.3597 bits (233), Expect = 6.586e-19
Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
            IQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.784e-32
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 2 
Query:  371 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 598
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = 2 
Query:  143 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGG 370
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+ RTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 91.6633 bits (226), Expect = 4.269e-18
Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
            IQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.668e-28
Identity = 61/76 (80.26%), Postives = 68/76 (89.47%), Query Frame = 2 
Query:  143 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGG 370
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED++TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 125.176 bits (313), Expect = 3.484e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 2 
Query:  371 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 598
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 85.1149 bits (209), Expect = 3.995e-16
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
            I DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:   30 IADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.762e-28
Identity = 59/76 (77.63%), Postives = 69/76 (90.79%), Query Frame = 2 
Query:  143 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGG 370
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLEDS+T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 122.479 bits (306), Expect = 2.258e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 2 
Query:  371 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 598
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 85.8853 bits (211), Expect = 2.342e-16
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
            I DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:   30 IADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 2 
Query:  404 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 592
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 2 Score: 118.242 bits (295), Expect = 4.259e-26
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 2 
Query:  176 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLR 364
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLED RTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 3 Score: 91.2781 bits (225), Expect = 5.575e-18
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 136
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:   19 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = 2 
Query:  377 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGE 601
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGQ 77

HSP 2 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2 
Query:  149 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGG 370
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
            +++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   30 VEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 2 
Query:  149 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGG 370
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 2 
Query:  377 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 598
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
            +++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   30 VEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2 
Query:  149 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGG 370
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 2.674e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2 
Query:  377 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 598
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
            +++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   30 VEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2 
Query:  149 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGG 370
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 2.674e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2 
Query:  377 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 598
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
            +++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   30 VEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
[Close]
BLAST of GO242002 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 2 
Query:  143 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDSRTLADYNIQKESTLHLVLRLRGGMQI 379
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 2 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 2 
Query:  371 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGE 601
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG+
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGD 77

HSP 3 Score: 70.0922 bits (170), Expect = 1.330e-11
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 2 
Query:    2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 151
            +++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:   30 VEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79
The following BLAST results are available for this feature:
BLAST of GO242002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
UBIQ_LEIMA2.109e-3393.42Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1[more]
UBIQ_LEITA6.784e-3290.79Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3... [more]
UBIL_NPVOP2.668e-2880.26Ubiquitin-like protein OS=Orgyia pseudotsugata mul... [more]
UBIL_NPVAC7.762e-2877.63Ubiquitin-like protein OS=Autographa californica n... [more]
UBIQ_LUMTE8.581e-2795.24Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ... [more]
RUB2_ORYSJ1.568e-2062.67NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap... [more]
RUB1_DESAN1.568e-2064.86NEDD8-like protein RUB1 OS=Deschampsia antarctica ... [more]
RUB1_ORYSJ2.047e-2063.51NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap... [more]
RUB1_ARATH2.047e-2063.51NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN... [more]
NEDD8_DROME2.047e-2058.23NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank description650 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 793 5, mRNA sequence.