GO241906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.154e-12 Identity = 48/183 (26.23%), Postives = 87/183 (47.54%), Query Frame = 3 Query: 147 NGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 + + V +D +V ++ +C+ + + V + + +L+ S + D ++ K+ L GH + +HP G +ASG+ DT +LWD+R + KG+ A+R L+F+ DG++LA A V ++D +G + + + G + I F P+ L G ADRT Sbjct: 31 SSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKG-CVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRT 212
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.154e-12 Identity = 50/182 (27.47%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 153 SKRVIAAN-NDAKVRIFDAENFSCLNRFSYDWS-VNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 S R++A +D +V ++ +C+ + S V + ++ +L+ S + D ++ K+ L GH + +HP G +ASG+QDT +LWDIR + +G+ A+R L+F+ DG++LA A V ++D +G + + G + + F P+ L G +DRT Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212 HSP 2 Score: 68.9366 bits (167), Expect = 5.305e-11 Identity = 49/177 (27.68%), Postives = 86/177 (48.59%), Query Frame = 3 Query: 162 VIAANNDAKVRIFDAENFSCLNRF-SYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDL--FGEIAGISFSPDTESLFVGVA 683 V + + D ++++D C+ R+ + +V SPDGK LA D + D +GK+ GH +HP+ +LASG+ D T R WD+ Q ++ ++G G +R++ F DG L + D + V+ E +C ++ L +G++A ++ D +GVA Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCL-YSGCQDSLRVYGWEP--ERCFDVVLVNWGKVADLAICNDQ---LIGVA 289
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.154e-12 Identity = 50/182 (27.47%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 153 SKRVIAAN-NDAKVRIFDAENFSCLNRFSYDWS-VNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 S R++A +D +V ++ +C+ + S V + ++ +L+ S + D ++ K+ L GH + +HP G +ASG+QDT +LWDIR + +G+ A+R L+F+ DG++LA A V ++D +G + + G + + F P+ L G +DRT Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212 HSP 2 Score: 68.9366 bits (167), Expect = 5.305e-11 Identity = 49/177 (27.68%), Postives = 86/177 (48.59%), Query Frame = 3 Query: 162 VIAANNDAKVRIFDAENFSCLNRF-SYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDL--FGEIAGISFSPDTESLFVGVA 683 V + + D ++++D C+ R+ + +V SPDGK LA D + D +GK+ GH +HP+ +LASG+ D T R WD+ Q ++ ++G G +R++ F DG L + D + V+ E +C ++ L +G++A ++ D +GVA Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCL-YSGCQDSLRVYGWEP--ERCFDVVLVNWGKVADLAICNDQ---LIGVA 289
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 2.154e-12 Identity = 47/181 (25.97%), Postives = 83/181 (45.86%), Query Frame = 3 Query: 153 SKRVIAANNDAKVRIFD-AENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 S+ ++ D KV ++ + + L+ + + +++ + L+A S + D + K+ L GH + +HP G ASG+ DT ++WDIR + KG+ + L+FT DGR++ + V V+D +G + + G+I + F P L G ADRT Sbjct: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRT 208
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.813e-12 Identity = 46/186 (24.73%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 141 SPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG-YVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 SP+G K + +A+ D ++I+ A + + +++ + S D KL+ D I D +SGK+ LKGH +Y F +++P ++ SG+ D R+WD+ N + ++ + + + F DG + V ++DT +G + + E++ + FSP+ + + G D T Sbjct: 55 SPDG-KWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDV-NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNT 238
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.674e-12 Identity = 48/185 (25.95%), Postives = 87/185 (47.03%), Query Frame = 3 Query: 141 SPNGSKRVIAANNDAKVRIFDAENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG-YVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 SP+G + + + + D ++I+ + + +N S S D KL+ D + D SG+ LKGH +Y F ++P G ++ASG+ D T R+W RN ++ + G+ + ++ F DG +LA V ++D+ +G VK + I + FSP+ + + + T Sbjct: 116 SPDG-RYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARN-GNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNT 298
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: YQ95_SCHPO (Uncharacterized WD repeat-containing protein C18.05c OS=Schizosaccharomyces pombe GN=SPCC18.05c PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.267e-12 Identity = 37/132 (28.03%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 156 KRVIAANNDAKVRIFDAENFS--CLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLA 545 +R+++A++D ++ ++D + + + VN+ S SPDG+ +A + + D ++GK L+GH+ + AW D R+L S +QDTT ++WD+R+ L G+ + A+ ++ DG+ +A Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFD-LPGHEDQVFAVDWSPDGQRVA 489
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: WDR38_MOUSE (WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.185e-12 Identity = 46/148 (31.08%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 249 VNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 VN ++ SPDG+ L D + +SG++ L GH + + PDGR++AS + D + RLWD+ S+ L VLKG+ ++ + F+ D + LA V++ +SG + I FSP ++SL G D T Sbjct: 29 VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVAR-SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDST 175
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 8.185e-12 Identity = 46/193 (23.83%), Postives = 88/193 (45.60%), Query Frame = 3 Query: 117 TNTVDVFQSPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 +N + + + + +D +V ++ +C+ + + + + +S +L+ S + D ++ K+ L GH + +HP G +ASG+ DT +LWD+R + K + A+R L+F+ DG++LA A V ++D +G V + G + + F P L G +DRT Sbjct: 21 SNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRT 212
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: YN19_SCHPO (Uncharacterized WD repeat-containing protein C577.09 OS=Schizosaccharomyces pombe GN=SPBC577.09 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.396e-11 Identity = 47/154 (30.52%), Postives = 71/154 (46.10%), Query Frame = 3 Query: 180 DAKVRIFDAENFSCLNRFSYDWSVNNTSVSPDGK--LLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGR-ILASGNQDTTCRLWDIRNLSQSLTVLK-------------GNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 593 D ++++D F+ + + + + SP L+A S+ + D QSG T +L GH A W P +LASG+ D TCRLWDIR +S S + + G + L +TSD R+LA D + V++ ESG Sbjct: 125 DHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHCLIATAYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESG 278 The following BLAST results are available for this feature:
BLAST of GO241906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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