GO241906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.929e-11 Identity = 49/179 (27.37%), Postives = 90/179 (50.28%), Query Frame = 3 Query: 69 PGVAF-CTNLTTDDNAITNTVDVFQSPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWH-PDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGY 596 P VAF CT+ + V SP+GS + + + D V ++DA + +N + + V++ + +P+G+ LA D + DA++G L GH +Y F + G +LASG+ D T RLWD+R+ + L + + + + F+ DG + + + ++DT++G+ Sbjct: 26 PTVAFRCTHALSGHTKAVAAVKF--SPDGSL-LASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRS-GRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGH 200
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.050e-11 Identity = 48/180 (26.67%), Postives = 85/180 (47.22%), Query Frame = 3 Query: 162 VIAANNDAKVRIFDAENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVK---CQEIDLFGEIAGISFSPDTESLFVGVADRT 692 + +A+ D V ++ + + S+ SP+GK+ A G I D G + LKGH D ++ ++ PDG ILAS ++D T RLW R+ ++L VL G+ ++ +F+ DG+ L + ++D + ++ E+ F G+++ P+ L V D T Sbjct: 575 IASASRDGTVHLWTPQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDL-DGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRS-GKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLDGNLIRQFGLPEVAFF----GVNWHPNGNLLAVAADDGT 748
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: WDR88_HUMAN (WD repeat-containing protein 88 OS=Homo sapiens GN=WDR88 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.050e-11 Identity = 53/188 (28.19%), Postives = 87/188 (46.28%), Query Frame = 3 Query: 153 SKRVIAANNDAKVRIFDAENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECL-IADAQSGKVTGNLKGHLDYSFASA-WHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLF------GEIAGISFSPDTESLFVGVADRT 692 S RVIAA+ D VR +D E L + YD + + SPDGK + D + I DA++ +K H S S + PD + +AS + D ++WD+ + + LT+ K + AI FT G FL + + +++ +G + + + G ++ F+ D+ L G DRT Sbjct: 157 SSRVIAASYDKTVRAWDLETGKLLWKVRYDTFIVSCKFSPDGKYVVSGFDVDHGICIMDAENITTVSVIKDHHTRSITSCCFDPDSQRVASVSLDRCIKIWDVTSQATLLTITKAHSNAISNCCFTFSGHFLCTSSWDKNLKIWNVHTGEFRNRGACVTLMQGHEGSVSSCHFARDSSFLISGGFDRT 344
BLAST of GO241906 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 9.050e-11 Identity = 47/178 (26.40%), Postives = 82/178 (46.07%), Query Frame = 3 Query: 162 VIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLFGEIAGISFSPDTESLFVGVADRT 692 +++++ D VR++ + F+CL + +++ V +T SP G G + + GHL + +HP+ +A+G+ D T RLWD+ N + + G+ G I +L F+ +GRFLA V ++D G + + + + FS D E L G D T Sbjct: 558 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 734 The following BLAST results are available for this feature:
BLAST of GO241906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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