GO241902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_HAEIN (Signal recognition particle protein OS=Haemophilus influenzae GN=ffh PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 5.158e-54 Identity = 112/245 (45.71%), Postives = 162/245 (66.12%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA-NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKI-MEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVDTAGRL +D MMDE+K V LNP E L VDAMTGQ+AA FN + +TG ILTK+DGD+RGGAALS+++++GKPIK +G GE+ E LEPF+PDR+A RILGMGDVLS +E + + +E AE+M +K +F +DF +Q + +MG M ++ +PG ++ + + + + MEA+I +MT +ER P+++ S RR+R+A SG Q V++L+ Q +M+ MK + Sbjct: 188 IVDTAGRLHVDTEMMDEIKQVHAALNPIETLFTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTEALEPFHPDRVASRILGMGDVLSLIEDLERSVDREKAEKMAQKFKKGDDFTLDDFREQLIEMKKMGGMMSMLEKLPGAKNLSEHVKNQVDDKMFVKMEAIINSMTLKERANPDIIKGS--RRRRIALGSGTQVQDVNKLLKQFDEMQRMMKKM 430
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_MYCMY (Signal recognition particle protein OS=Mycoplasma mycoides GN=ffh PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 1.113e-48 Identity = 92/256 (35.94%), Postives = 168/256 (65.62%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPALS 768 I+DTAGRLQ+D+ +M EL ++K+ +P E+LLVVD M+GQE + FN ++ ++G ++TKLDGD+RGGA LS+ ++ PIK +G GE L FYP RMA R++GMGD+ + E+A E + + ++ ++ FD D Q +A+MGS+++++ M+P + K++ +Q++EA++ L + ++++MT +ER P +L ++ R+ R+ + SG++E+ ++L+ + + ++ + +++SG +P LS Sbjct: 188 ILDTAGRLQVDQVLMKELDNLKKKTSPNEILLVVDGMSGQEIINVTNEFNDKLKLSGVVVTKLDGDARGGATLSISYLTKLPIKFIGEGEGYNALAAFYPKRMADRLMGMGDIETLFERAVENIDERSIQKTMNRMFLGQFDLEDLRNQLAQIAKMGSLNKLMKMLP-INKVSESQIQEAQRKLAVFSILMDSMTLKERRDPRVL-KAISRKNRIIKGSGRSEKEFNELINSFEKGKKQVLEITKMIKSGRMPNLS 441
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_MYCGE (Signal recognition particle protein OS=Mycoplasma genitalium GN=ffh PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.454e-48 Identity = 95/253 (37.55%), Postives = 162/253 (64.03%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLP 759 I DTAGRLQ ++ +MDEL VK LNP E+++VVD ++GQE + TF+ + +TG I++KLD D+R GAALS+ + PIKL+G E+++ LE F+P+R+A RILG+GDV+S VEKA++V ++D + K+ D D L + + +MGS+S +I M+P ++ E +++ + +I +MT EER P+L+ P R++R+ + SG+ +++L+ + +M+++ + ++++GS P Sbjct: 186 ICDTAGRLQTNETLMDELVSVKNELNPDEIIMVVDGLSGQEIINVAQTFHKRLKLTGFIISKLDSDARAGAALSLASLLQVPIKLIGVSEKLDGLEQFHPERIANRILGLGDVMSLVEKAEQVFDKKDLTKTISKMFLGKMDLEDLLIYMQQMHKMGSVSSLIKMLPANFSVSEENAELIENKIELWKVLINSMTREERRHPKLINRDPNRKQRIIKGSGRKMDELNKLMKEWNKMQLKATEMGKLLKTGSNP 438
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_MYCPN (Signal recognition particle protein OS=Mycoplasma pneumoniae GN=ffh PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.742e-47 Identity = 93/253 (36.76%), Postives = 157/253 (62.06%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLP 759 I DTAGRLQ ++ +MDEL +K L+P E+L+VVD ++GQE + F+ + +TG I+TKLD D+R GAALS+ + PIKL+G E++ LE F+P+R+A RILG+GDV++ VEKA+EV ++ + K+ D D L + +MGS+S ++ M+PG ++ V E +K+ + +I +MT EER P+L+ P R++R+ + SG+ +++L+ + +++ + + +++ G P Sbjct: 186 ICDTAGRLQTNQELMDELVAIKNELHPDEILMVVDGLSGQEIINVAKEFHNRLKLTGFIITKLDSDARAGAALSLTSLLEVPIKLMGTSEKLTGLEQFHPERIASRILGLGDVMTLVEKAEEVFDKQSLTKTVSKMFLGKMDLEDLLLYMEQMNQMGSVSSIVKMLPGNLTVSDDHVESIEAKVKLWKVLINSMTREERRHPKLINRDPSRKQRIIKGSGRKMDELNKLMKEWSKLQTKTAEMGRMLKGGKNP 438
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_BUCAI (Signal recognition particle protein OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ffh PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 5.716e-45 Identity = 97/246 (39.43%), Postives = 159/246 (64.63%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA-NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 ++DTAGRL IDK MM+E++ ++ + E LL+VD+M GQ+A + FN ++ I+G ILTK DGDSR G ALS++ ++GKPIK +G GE++ LEPF+P+R+A RILGM D++S +E +E + Q +++ KK+ +F+ NDFL Q + + ++G ++ +++ + + + +LK +EAMI +MTP+ER KP ++ S R++R+A SG Q V++L+ +R MK + Sbjct: 188 LIDTAGRLHIDKKMMNEIQQIQVISKAIETLLIVDSMMGQDAINMAKIFNNDLLISGIILTKTDGDSRSGIALSMRYITGKPIKFIGTGEKIISLEPFHPERIADRILGMNDIMSLIEDIEEKVDQSQIQKLTKKLKKGHDFNLNDFLTQIKQMKKIGGLNYFANKFSINHQLSNNISLLNTDKNTLKKIEAMICSMTPKERIKPIIIKGS--RKRRIALGSGTQIQDVNKLLKNFDDIRRIMKKI 431
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_THEON (Signal recognition 54 kDa protein OS=Thermococcus onnurineus (strain NA1) GN=srp54 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.172e-44 Identity = 98/245 (40.00%), Postives = 149/245 (60.82%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM-QQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVD+AGR + +K++++E+K + + P EV+LV+D GQ+A F I I+TKLDG ++GG ALS +G PIK +G GER++DLEPF P R R+LG+GD+ +EK +E+ QQE EE +K + F+ D Q + +MG + +++ MIPGMG P VR E+ LK + ++++MT EE E PE++ S R KR+A+ SG + Q V +L+ Q QM+ K++ Sbjct: 187 IVDSAGRHKEEKSLIEEMKQISAAIKPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLGDIQGLLEKFEELQKQQEFREEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQMIPGMGYSLPDDAVRVGEERLKKFKVIMDSMTEEELEHPEIINYS--RIKRIARGSGTSIQEVRELLHQYNQMKKMFKSM 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_PYRKO (Signal recognition 54 kDa protein OS=Pyrococcus kodakaraensis GN=srp54 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.837e-44 Identity = 96/245 (39.18%), Postives = 147/245 (60.00%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM-QQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVD+AGR + +K +++E++ + + P EV+LV+D GQ+A F I I+TKLDG ++GG ALS +G PIK +G GER++DLEPF P R R+LG+GD+ +EK +E+ +QE EE +K + F+ D Q + +MG + +++ MIPG+G P VR E+ LK + ++++MT EE E PE++ S R KR+A+ SG T V +L+ Q QM+ K+L Sbjct: 187 IVDSAGRHKEEKGLIEEMRQISEAIKPHEVILVIDGTIGQQAYNQAMAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFVSRLLGLGDIQGLLEKIEELQKEQEFREEDMEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLGYSLPEDAVRVGEEKLKRYKVIMDSMTEEELENPEIINYS--RIKRIARGSGATTAEVRELLNQYNQMKKMFKSL 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_THEGJ (Signal recognition 54 kDa protein OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=srp54 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.839e-44 Identity = 96/245 (39.18%), Postives = 148/245 (60.41%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM-QQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVDTAGR + + +++E+K + + P EV+LV+D GQ+A F I I+TKLDG ++GG ALS +G PIK +G GE+++DLEPF P R R+LG+GD+ +EK +E+ +QE EE +K + F+ D Q + +MG + +++ MIPG+G P + VR E+ L+ ++++MT EE E P+++ S R KR+A+ SG + + V +L+AQ QMR KNL Sbjct: 187 IVDTAGRHKEESGLIEEMKQISEAIKPHEVILVIDGTIGQQAYHQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGDIQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLGYSLPDEAVRVGEEKLRRYRIIMDSMTEEELENPDIINYS--RIKRIARGSGTSTREVRELLAQYNQMRKMFKNL 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METJA (Signal recognition 54 kDa protein OS=Methanocaldococcus jannaschii GN=srp54 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.078e-43 Identity = 93/232 (40.09%), Postives = 142/232 (61.21%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAIL-TKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLV 690 I+DTAGR + +K +++E+K +K + NP E++LV+D GQ+A F +G G+I+ TKLDG ++GG ALS + PIK +G GE ++DLEPF P + R+LGMGD+ S +EKA++ M E EE IM F N+ + Q + MGSM +++ MIPG G P ++ E +K + +I +MT EERE P+++ S +R R+A+ SG TE V +++ Sbjct: 186 IIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDLESLLEKAED-MVDEKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFGGAMPKELSHLTEAKIKKYKVIISSMTKEERENPKIIKASRIR--RIARGSGTTENDVREVL 414
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_BUCBP (Signal recognition particle protein OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ffh PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 3.137e-43 Identity = 92/245 (37.55%), Postives = 152/245 (62.04%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKI-MEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 ++DTAGRLQIDK MM+EL DV + +P E V DAM GQ++ ++ FN + ++ I+TK D D+R G LS+K ++ KPIK +G GE++E+LE FYPDR+A RILGMGD+LS +E + + ++ ++ I N F+FND L + ++G ++ ++G +P I + ++++ + M+ +I +MT ER +PEL+ S R++R++ SG ++QL+ Q ++ MK + Sbjct: 188 LIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSINVINEFNKYLPVSSFIITKTDSDTRAGIILSIKYLTKKPIKFIGTGEKLEELELFYPDRIASRILGMGDMLSLIENIENKIDKKHIKKFSNTIKKYNTFNFNDMLLHINQIKKIGGVNSILGKLPKTQTIFNSFQNNIDENILLKMKTIINSMTISERHQPELIKGS--RKRRISLGSGIPIPEINQLLKQFNNIKKIMKTI 430 The following BLAST results are available for this feature:
BLAST of GO241902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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