GO241902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METTH (Signal recognition 54 kDa protein OS=Methanobacterium thermoautotrophicum GN=srp54 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 5.916e-42 Identity = 91/243 (37.45%), Postives = 143/243 (58.85%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 I DTAGR + +K ++ E++++ ++ P E +LV+D GQ+A F I I+TKLDG ++GG ALS G PIK +G GER++DLE F P+R R+LGMGD+ S +EK +EV ++E AEE I+S F D Q + +MG + +V+ M+PG GK+ R E++++ ++++MT EE EKP+++ S +R R+A+ SG + V +L+ + MK L Sbjct: 184 IFDTAGRHKEEKDLLREMEELSAIVEPHEAILVIDGTIGQQAREQALAFRKATDIGSIIVTKLDGSAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFISRLLGMGDLRSLLEKVEEVSEEEIAEESLDAILSGKFTLRDMRVQFEMMGKMGPLQQVMSMLPGAGKLPKDASRMTEETIRKYLIIMDSMTEEELEKPDIIKHSRIR--RIARGSGTRNEDVKELLKYYRVTKKAMKGL 424
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_PYRFU (Signal recognition 54 kDa protein OS=Pyrococcus furiosus GN=srp54 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 7.726e-42 Identity = 93/245 (37.96%), Postives = 148/245 (60.41%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQ-EDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVDTAGR + DKA+++E+K + V++P EV+LV+D GQ+A F I I+TKLDG ++GG ALS +G PIK +G GE+++D+EPF P R R+LG+GD+ +EK +E+ ++ E EE ++ + F D Q + +MG + +++ MIPG+G P V E+ LK + ++++MT EE PE++ S R KR+A+ SG + + V +L+ Q QM+ K++ Sbjct: 187 IVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGYSLPDDVISIGEERLKKFKVIMDSMTEEELLNPEIINYS--RIKRIARGSGTSTKDVKELLDQYRQMKKLFKSM 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METVS (Signal recognition 54 kDa protein OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=srp54 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.009e-41 Identity = 93/257 (36.19%), Postives = 151/257 (58.75%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAIL-TKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPAL 765 I+DTAGR + ++++++E+K +K + NP E++LV+D GQ+A F + G+IL TKLDG ++GG ALS PIK +G GE +++LE F P + R+LGMGD+ S +EK ++VM E EE I+ F + Q T+++MG M +++GMIPG G P + + E+ LK + M+++MT EE+E PEL+ S R +R+A+ +G + + L+ + KN G ++ G +P + Sbjct: 186 IIDTAGRHKEEESLLEEMKQMKEITNPNEIILVIDGTLGQQAKNQAKAFKDAVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLETFDPKKFISRLLGMGDLDSLLEKTEDVM-DESTEESIDSILKGKFTLVELYAQLETISKMGPMKQIMGMIPGFGGNMPKEAAQLTEQKLKRYKIMMDSMTMEEKENPELIKTS--RLQRIAKGAGVKQDEIKDLL----KYYATTKNAFGNLKRGKMPKM 435
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_META3 (Signal recognition 54 kDa protein OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=srp54 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.721e-41 Identity = 91/254 (35.83%), Postives = 151/254 (59.45%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAIL-TKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSL 756 I+DTAGR + + +++E+K++K NP E++LV+D GQ+A F + G+IL TK+DG ++GG ALS G PIK +G GE+++DLEPF P + R+LGMGD+ S +EK ++++ +D EE +M F N+ Q +++MGSM +++ MIPGMG P + E LK + ++++MT E+E P+++ S R KR+A+ +G ++ + +L+ + KN M+SG + Sbjct: 186 IIDTAGRHKEESGLLEEMKEMKEKFNPEEIILVIDGTLGQQAKNQAKAFKDAVENIGSILITKMDGSAKGGGALSAVAEIGAPIKFIGTGEKVDDLEPFDPKKFISRLLGMGDLDSLLEKTEDII-DDDTEESLDAMMRGKFTLNELYSQLEAISKMGSMKQLMAMIPGMGTNLPKGAADITEHKLKKYKIIMDSMTSTEKENPDIIKTS--RMKRIAKGAGVKQEEIKELL----KYYSTTKNAFQNMKSGKM 432
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METM7 (Signal recognition 54 kDa protein OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=srp54 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.834e-41 Identity = 93/257 (36.19%), Postives = 151/257 (58.75%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAIL-TKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPAL 765 I+DTAGR + ++ ++ E++++K + NPTE++LV+D GQ+A F + G+IL TKLDG ++GG ALS PIK +G GE +++LE F P + RILGMGD+ S +EK +++M E EE I+ F + Q T+++MG M +++ MIPGMG P + + E LK + M+++MT EE+E PEL+ S R +R+A+ +G ++ + L+ + KN G ++ G +P + Sbjct: 186 IIDTAGRHKEEEGLLAEMREMKDLTNPTEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGMGDLDSLLEKTEDIM-DESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGNLPKEAAQLTEDKLKRYKIMMDSMTMEEKENPELIKAS--RLQRIAKGAGVKQEEIKDLL----KYYSTTKNAFGNLKRGKMPKM 435
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_BUCAP (Signal recognition particle protein OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ffh PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.834e-41 Identity = 90/246 (36.59%), Postives = 150/246 (60.98%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSA-NFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ--VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 ++DTAGRL I+ MM+E+ ++ + P E LL+VD+M GQ+A + F+ + I+G ++TK D D+R G ALS++ ++GKPIK +G GE++ LEPF+P+R+A RILGM V+S ++ +E + Q + + KK +F+ NDFL Q + + MG+++ I KI + E + +L +EA+I +MT +ER P ++ S R++R+A SG Q V++L+ ++ MK + Sbjct: 188 LIDTAGRLHINTEMMNEINTIQNISKPIETLLIVDSMMGQDAINIAKKFSASLSISGIVITKTDSDARSGVALSIRHITGKPIKFIGTGEKLHQLEPFHPERIADRILGMNQVISLIKDIEEKVNQSQVKNLTKKFRKGDDFNLNDFLIQLKEMKNMGNLNYFIEKF-SKNKILSNNPLLGENKNTLNRIEAIIYSMTHKERMHPIIIKGS--RKRRIALGSGTKIQDVNKLLKNFDNIKKIMKKI 430
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METMP (Signal recognition 54 kDa protein OS=Methanococcus maripaludis GN=srp54 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.457e-40 Identity = 92/257 (35.80%), Postives = 150/257 (58.37%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAIL-TKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPAL 765 I+DTAGR + ++ ++ E+K++K + NP E++LV+D GQ+A F + G+IL TKLDG ++GG ALS PIK +G GE +++LE F P + RILG+GD+ S +EK +++M E EE I+ F + Q T+++MG M +++ MIPGMG P + + E LK + M+++MT EE+E PEL+ S R +R+A+ +G ++ + L+ + KN G ++ G +P + Sbjct: 186 IIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGDLDSLLEKTEDIM-DESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGNMPKEAAQLTEAKLKRYKIMMDSMTMEEKENPELIKTS--RLQRIAKGAGVKQEEIKDLL----KYYSTTKNAFGNLKRGKMPKM 435
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METM6 (Signal recognition 54 kDa protein OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=srp54 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.903e-40 Identity = 93/257 (36.19%), Postives = 149/257 (57.98%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAIL-TKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPAL 765 I+DTAGR + ++ ++ E+K++K + NP E++LV+D GQ+A F + G+IL TKLDG ++GG ALS PIK +G GE +++LE F P + RILG GD+ S +EK +++M E AEE I+ F + Q T+++MG M +++ MIPGMG P + + E LK + M+++MT EE+E PEL+ S R +R+A+ +G + + L+ + KN G ++ G +P + Sbjct: 186 IIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKDSVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGFGDLDSLLEKTEDIM-DESAEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGNMPKEAAQLTEDKLKRYKIMMDSMTMEEKENPELIKTS--RLQRIARGAGVKPEEIKDLL----KYYSTTKNAFGNLKRGKMPKM 435
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METM5 (Signal recognition 54 kDa protein OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=srp54 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.485e-40 Identity = 92/257 (35.80%), Postives = 150/257 (58.37%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAIL-TKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPAL 765 I+DTAGR + +++++ E+K++K + NP E++LV+D GQ+A F + G+IL TKLDG ++GG ALS PIK +G GE +++LE F P + RILG+GD+ S +EK +++M E EE I+ F + Q T+++MG M +++ MIPGMG P + + E LK + M+++MT EE+E PEL+ S R +R+A+ +G + + L+ + KN G ++ G +P + Sbjct: 186 IIDTAGRHKEEESLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGDLDSLLEKTEDIM-DESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGNLPKEAAQLTEDKLKRYKIMMDSMTLEEKENPELIKTS--RLQRIAKGAGVKQDEIKDLL----KYYSTTKNAFGNLKRGKMPKM 435
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_THEAC (Signal recognition 54 kDa protein OS=Thermoplasma acidophilum GN=srp54 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.233e-39 Identity = 89/251 (35.46%), Postives = 146/251 (58.17%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEV-MQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVI-----GMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMG 735 I+DT+GR +D + DE++ +K + P EVL+++DA GQ+A FN IG+TG I+TK+DG ++GG ALS PI +G GE M+DLE F P + R+LG+GD+ S E QE + +E+A+E +K+M+ F+ D ++ G M +++ IPG KI ++++ AE L++ ++++MT EE E PE++ + R R+A+ +G E+ V L+ + M+ MK + G Sbjct: 182 IIDTSGRDSMDAELFDEIRRIKEAVAPDEVLMIIDATMGQQAGPEAKAFNDAIGVTGIIITKMDGTAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRLLGLGDLESLFETVQEADITEEEAQESFEKLMTGKFNLKDMYDVWEKFSKPGLMKKLVDALPLARIPGSQKIDDSKIQSAEDKLRMYRIIMDSMTFEELENPEII--NAKRITRIARGAGVREEDVRMLLKEFKAMKNNMKMMKG 430 The following BLAST results are available for this feature:
BLAST of GO241902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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