GO241902

Overview
NameGO241902
Unique NameGO241902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_UNCMA (Signal recognition 54 kDa protein OS=Uncultured methanogenic archaeon RC-I GN=srp54 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.104e-39
Identity = 94/255 (36.86%), Postives = 146/255 (57.25%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP--GM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSL 756
            IVDTAGR  ++  ++ E+KD+  +      LLV+DA  GQ+A+     FN  IGITG ++TKLDG ++GG ALS    +   I  +G GE  +D+E F PD    R+LGMGD+ + VE+A EV+Q++D     +K+M   F  ND   Q   + +MG + +++ M+P  G+ G IT    +  +  LK  + ++++MT  ER+ P+L+  S  R  RVA  SGK+ + V +L+     M+  MK + G    G +
Sbjct:  182 IVDTAGRHALETDLIQEMKDIYGLTKFDHKLLVLDAAIGQQASEQARAFNDAIGITGVVITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPDDMERFDPDGFISRLLGMGDLRALVERANEVLQKDDVN--VEKMMQGKFTLNDMYDQLEAINKMGPLKQIMSMLPLGGLGGNITDDMYKMTQDKLKGYKVIMDSMTAAERDDPKLIGSS--RIARVAHGSGKSPEEVRELLKYHKMMQKAMKGMKGGGPGGKM 432          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METBU (Signal recognition 54 kDa protein OS=Methanococcoides burtonii (strain DSM 6242) GN=srp54 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.687e-39
Identity = 90/248 (36.29%), Postives = 140/248 (56.45%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP--GMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMG 735
            IVDTAGR  ++  ++DE++ +  +  P   LLV+D   GQ+A+     FN  +GI+G +++KLDG ++GG ALS    +   I  +G GE  +DLE F PDR   R+LGMGD+ S +EKA+E + +ED +   + +M   F   D   Q   + +MG M +++ M+P  GMG K++    +  E  +K    ++++MT EE   P LL  S  R KR++  SG +   V +L+     M+  MK L G
Sbjct:  182 IVDTAGRHSLEADLIDEMEQIHEIAQPDYKLLVLDGAIGQQASEQARAFNDSVGISGVVISKLDGTAKGGGALSAVSETNSAIAFIGVGETPDDLEKFEPDRFISRLLGMGDIKSLIEKAEETLSEEDID--MEAMMRGRFTLKDMYSQLEAMNKMGPMKQIMQMLPLGGMGAKLSDDAYKVTEDKMKGYRVLMDSMTEEELLNPRLLGSS--RIKRISLGSGSSPDAVRELLKYYKMMQNAMKGLRG 425          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METST (Signal recognition 54 kDa protein OS=Methanosphaera stadtmanae (strain DSM 3091) GN=srp54 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.781e-38
Identity = 84/231 (36.36%), Postives = 138/231 (59.74%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQV-REAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLV 690
            +VDTAGR + +K ++DE+ ++ +++ P EV+LV+D   GQ+A +   TF     I   I++KLDG ++GG ALS       PIK +G GER++D E F P+R   R+LGMGD+ + +EKA EV  ++  +EM   I+S  F   D   Q   + +MG + +++ +IPG+G   PA   +  E+ L + + ++ +MT  E E PE++ +S  R  R+++ +G T   V  L+
Sbjct:  185 LVDTAGRHKEEKDLLDEMAELSQIVQPDEVILVIDGTIGQQARSQAETFKKTTDIGSIIVSKLDGSAKGGGALSAVAEIRAPIKFIGTGERVDDFEAFDPERFISRLLGMGDLDTLIEKAAEVTSEKSDKEMIDSIISGKFTLKDMENQLEMMNKMGPIQQIMKLIPGLGNQLPANASKVTEEKLGMYKILMNSMTTYELENPEVIKKS--RINRISRGAGLTNDDVKDLL 413          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METKA (Signal recognition 54 kDa protein OS=Methanopyrus kandleri GN=srp54 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.781e-38
Identity = 91/259 (35.14%), Postives = 159/259 (61.39%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE----AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPAL 765
            IVDTAGR ++ + ++DEL+++   + P EVLLV+DA  GQ+A      F+  + +TG ++TKLD  ++GG ALS    +G PIK VG GER++DLE F P     R+LG+GD+   + + +E++++E+  E    ++   F   D  +Q   +++MG + +++  +PGMG      VR+     E+ LK  + ++++MT +E E PE+L +S +R  R+A  SG +E+ V +L+   ++M   MK+++  ++SG +P +
Sbjct:  186 IVDTAGRDRLSEDLIDELREMAERIEPHEVLLVLDATVGQKAGDHAEAFHEAVQLTGVVITKLDTAAKGGGALSAVARTGAPIKFVGTGERVDDLEEFNPRSFVARLLGIGDIDELLRRTEEMLEEEEKAE---DVLEGEFTLKDLYEQLEALSKMGPVDKLLQYVPGMG--GGRNVRKISQITEERLKKYKVIMDSMTEKELENPEILNKSRIR--RIAIGSGTSERDVIELLNH-YRM---MKDVIEDIQSGRIPRI 433          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_PYRAB (Signal recognition 54 kDa protein OS=Pyrococcus abyssi GN=srp54 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.326e-38
Identity = 87/245 (35.51%), Postives = 145/245 (59.18%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQ-EDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQV-REAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729
            IVDTAGR + +K +++E++ +   + P EV+LV+D   GQ+A      F     I   I+TKLD  ++GG ALS    +G PIK +G GE+++DLEPF P R   R+LG+GD+   +EK +E+ ++ E  EE  ++ +   F   D   Q   + +MG + +++ MIPG+G   P +V    E+ L+  + ++++MT EE   P+++  S  R KR+A+ SG + + V +L+ Q  QM+   K++
Sbjct:  187 IVDTAGRHKEEKDLIEEMRMISNEIKPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFVSRLLGLGDIQGLLEKFKELEKEVEFTEEDLERFLKGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGYSLPDEVISVGEERLRKFKVIMDSMTEEELMNPDIINYS--RIKRIARGSGTSVKDVKELLNQYNQMKKFFKSM 429          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_PYRHO (Signal recognition 54 kDa protein OS=Pyrococcus horikoshii GN=srp54 PE=3 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 5.182e-38
Identity = 87/245 (35.51%), Postives = 144/245 (58.78%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQ-EDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729
            IVDTAGR + +K +++E++ +   + P EV+LV+D   GQ+A      F     I   I+TKLD  ++GG ALS    +G PIK +G GE+++DLEPF P R   R+LG+GD+   +EK +E+ ++ E  EE   + +   F   D   Q   + +MG + +++ MIPG+G   P + +   E+ L+  + ++++MT EE   PE++  S  R KR+A+ SG + + V +L+ Q  QM+   K++
Sbjct:  187 IVDTAGRHKEEKDLIEEMRMISEEIRPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLGDIQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGYSLPDELISVGEERLRKFKVIMDSMTEEELMNPEIINYS--RIKRIARGSGTSIKDVKELLTQYNQMKKFFKSM 429          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METS3 (Signal recognition 54 kDa protein OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=srp54 PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 6.768e-38
Identity = 84/244 (34.43%), Postives = 139/244 (56.97%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729
            I DTAGR + ++ ++ E+  +  ++ PTE +LV+D   GQ+A      F+    +   I+TKLDG ++GG A+S    +G PIK +G GER++D E F P R   R+LGMGD+ + +EKA++ + ++ AE+  K +MS  F   D   Q   +  MG M +V+ MIPG+G K++    +  E  +   + ++ +MT +E E P+L+ +S +R  R+A  +G  E  V  L+      +  MK +
Sbjct:  184 IFDTAGRHKQEEDLIAEMDTLDDIIQPTESILVIDGTIGQQAGEQAKAFSQATDVGSIIITKLDGSAKGGGAMSAVAETGAPIKFIGTGERIDDFELFDPARFISRLLGMGDIQTLIEKAEDSIDEDMAEKTMKNMMSGKFTLVDMKNQFEMMNSMGPMQQVLSMIPGLGNKVSKEASKMTEDKIDGYKVIMSSMTKKEMENPKLIKQSRIR--RIAMGAGVEESEVRDLLKYYNNTKKTMKGI 425          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METTP (Signal recognition 54 kDa protein OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=srp54 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.840e-38
Identity = 90/250 (36.00%), Postives = 144/250 (57.60%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP--GMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVM 741
            IVDTAGR  ++  ++ E+KD+  V+N    LLV+DA  GQ+A+     FN  +GITG I+TKLDG ++GG ALS    +   +  +G GE   DLE F  DR   R+LGMGD+   +EKAQEV  + D +     +M   F   D  KQ   + +MG + +++ M+P  G+G +++  + +  ++ L+    ++++MT EE E P+++  S  R KR+A+ SG   + V +L+     M+  +K + G M
Sbjct:  182 IVDTAGRHALESDLIQEMKDIHAVVNADHKLLVMDAAIGQQASEQARAFNEAVGITGVIITKLDGTAKGGGALSAVAETKTSVAFIGVGETASDLEKFEADRFISRLLGMGDIKGLIEKAQEVQIESDVD--VDAMMKGKFTLKDMYKQLEAMNKMGPLKQIMQMLPFGGIGIELSDKEYQVTKERLEAYRFIMDSMTDEELEDPKIINAS--RIKRIARGSGTRPELVKELLKSHAAMQKAIKGMRGGM 427          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METBF (Signal recognition 54 kDa protein OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=srp54 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.154e-37
Identity = 88/251 (35.06%), Postives = 141/251 (56.18%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP-GMG-----KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMG 735
            IVDTAGR  ++  +++E++ +  V  P    +V+DA  GQ+A+     FN  +GITG I+TKLDG ++GG ALS    +  PI  +G GE  ED E F  DR   R+LGMGD+ S +EKA+E + +ED     + +M   F   D  KQ   + +MG + +++ M+P GMG     K++    +     +K  + ++++MT EE   P+L+  S  R KR+++ SG + + V +L+     M+  +K   G
Sbjct:  182 IVDTAGRHALEADLIEEMEQINAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDLKSLMEKAEETLSEEDVN--VEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPLGMGGMGGVKLSDEMFQATSDKMKNYKTIMDSMTEEEMTDPKLIGGS--RIKRISRGSGCSPEEVRELLKYHKTMQTALKGFRG 428          
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METAC (Signal recognition 54 kDa protein OS=Methanosarcina acetivorans GN=srp54 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.773e-37
Identity = 87/248 (35.08%), Postives = 139/248 (56.05%), Query Frame = 1
Query:    1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP-GMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMG 735
            IVDTAGR  ++  +++E++ +  V  P    +V+DA  GQ+A+     FN  +GITG I+TKLDG ++GG ALS    +  PI  +G GE  ED E F  DR   R+LGMGD+ S +EKA+E + +ED     + +M   F   D  KQ   + +MG + +++ M+P GMG  K +    +     +K  + ++++MT EE   P ++  S  R KR+++ SG + + V +L+     M+  +K   G
Sbjct:  182 IVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDLKSLMEKAEESLSEEDVN--VEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGGMKFSDEMFQATSDKMKNYKVIMDSMTEEEMTDPRVIGGS--RIKRISKGSGCSSEDVRELLKYHKTMQTALKGFRG 425          
The following BLAST results are available for this feature:
BLAST of GO241902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
SRP54_UNCMA2.104e-3936.86Signal recognition 54 kDa protein OS=Uncultured me... [more]
SRP54_METBU4.687e-3936.29Signal recognition 54 kDa protein OS=Methanococcoi... [more]
SRP54_METST1.781e-3836.36Signal recognition 54 kDa protein OS=Methanosphaer... [more]
SRP54_METKA1.781e-3835.14Signal recognition 54 kDa protein OS=Methanopyrus ... [more]
SRP54_PYRAB2.326e-3835.51Signal recognition 54 kDa protein OS=Pyrococcus ab... [more]
SRP54_PYRHO5.182e-3835.51Signal recognition 54 kDa protein OS=Pyrococcus ho... [more]
SRP54_METS36.768e-3834.43Signal recognition 54 kDa protein OS=Methanobrevib... [more]
SRP54_METTP8.840e-3836.00Signal recognition 54 kDa protein OS=Methanosaeta ... [more]
SRP54_METBF1.154e-3735.06Signal recognition 54 kDa protein OS=Methanosarcin... [more]
SRP54_METAC9.773e-3735.08Signal recognition 54 kDa protein OS=Methanosarcin... [more]

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Properties
Property NameValue
Genbank description550 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 690 5, mRNA sequence.