GO241902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METMA (Signal recognition 54 kDa protein OS=Methanosarcina mazei GN=srp54 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.276e-36 Identity = 87/251 (34.66%), Postives = 141/251 (56.18%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP-GMG-----KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMG 735 IVDTAGR ++ +++E++ + V P +V+DA GQ+A+ FN +GITG I+TKLDG ++GG ALS + PI +G GE ED E F DR R+LGMGD+ S +EKA+E + +ED + +M F D KQ + +MG + +++ M+P GMG K++ + +K + ++++MT +E P+L+ S R KR+++ SG + + V +L+ M+ +K G Sbjct: 182 IVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDLKSLMEKAEESLSEEDVN--VEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGGLGGVKLSDEMFQATSDKMKNYKVIMDSMTEDEMADPKLIGGS--RIKRISRGSGCSPEDVRELLKYHKTMQTALKGFRG 428
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_PYRAR (Signal recognition 54 kDa protein OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=srp54 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.177e-36 Identity = 87/245 (35.51%), Postives = 147/245 (60.00%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 I+DTAGR + ++A++ E+K + +NP EV+LVVDA G+ AA F + I I+TK+D +RGG AL+ +G +K +G GE +E+LEPF P + R+LGMGD+ + +EK + V ++ EE+ ++I S D F KQ ++ ++G +S+V ++PG KI+ Q+ ++K+LK A++ +MT EE + P++L S +R R+A +G T + V +++ ++ K L Sbjct: 184 IIDTAGRHRNEEALLQEVKAIYDAVNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIITKMDSTARGGGALAAVAKTGARVKFIGVGEDVEELEPFNPRKFVARLLGMGDLDALLEKIKAVFEE---EEVLEEIESGRLDLLTFKKQIDSLMKLGPLSKVFQLLPGGLAAKISEEQIELSQKNLKKWRAILSSMTMEELKNPDILNASRIR--RIALGAGVTPKDVKEMLTVYENLKKMSKTL 423
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METLZ (Signal recognition 54 kDa protein OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=srp54 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.844e-36 Identity = 89/246 (36.18%), Postives = 134/246 (54.47%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMG 735 IVDTAGR ++ ++DE+ V LNP LV+DA GQ A F+ IGI G I+TK+DG ++GG A+S + I +G GE ++DLE F P+ R+LGMGD+ + VEKA+E M ED + ++ F ND KQ V +MG + +V+ M+P P+ E +K ++++MTP+E ++P L+ S R RVA+ SG + + V L+ M+ +K G Sbjct: 182 IVDTAGRHALEDDLIDEITQVNAYLNPDHRWLVIDAALGQAARDQAKRFHEAIGIDGVIVTKMDGTAKGGGAMSAVAETQSGIVFIGNGETIDDLERFDPNGFISRLLGMGDLKALVEKAEESMNAEDVD--VNAMLRGKFTLNDMYKQLEAVQKMGPLKQVLSMLPMGNMNVPSDALEGTADKMKKFRIIMDSMTPQELDEPALINTS--RMIRVAKGSGSSVEEVRDLIKYYKMMQKTLKGFRG 423
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SULTO (Signal recognition 54 kDa protein OS=Sulfolobus tokodaii GN=srp54 PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 4.850e-36 Identity = 89/261 (34.10%), Postives = 152/261 (58.24%), Query Frame = 1 Query: 1 IVDTAGRLQIDKA--MMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS--ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQ------LFQMRVRMKNLMGVME 744 IVDTAGR + +++E+K++ + P EV+LV+DA GQ+A L + F+ I I+TK+DG ++GG ALS +G IK +G GE++++LE F P R RILGMGD+ S +EK + + + E ++ +++MS A D KQ + +MG +++++ M+PG G +I Q++ E+ +K ++ +MT +E + P ++ +S +R R+A+ SG + + V +L+ Q L +M R K L + E Sbjct: 182 IVDTAGRHGYGEEVKLLEEMKNMYSEIKPDEVILVIDASIGQKAYDLASRFHQASPIGSIIVTKMDGTAKGGGALSAVAATGAAIKFIGTGEKLDELEVFNPRRFVSRILGMGDIESIIEKIKGMEEYEQIQKKMEEVMSGKAKLTLRDIYKQLTALRKMGPLNKILQMLPGFGVFSQIPEEQLKLGEEKIKKFLVIMNSMTYKELDNPSIIDKSRIR--RIAKGSGTSPEEVKELLKQYQVTNNLLKMVKRRKGLAKLFE 440
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_HALVO (Signal recognition 54 kDa protein OS=Halobacterium volcanii GN=srp54 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.850e-36 Identity = 87/268 (32.46%), Postives = 146/268 (54.48%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ---KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-----AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPALSNLED 780 IVDTAGR ++ ++DE+++++ V+ P LLV+DA GQ A F+ IGI G ++TKLDG ++GG AL+ + I +G GE ++D+E F P+ R+LGMGD+ E+ + M + AE+ +++M NF D KQ + +MG + +V+ MIPG G Q+ + + ++ E ++++MT EE E P + S VR R+AQ SG+ E+ + +L+ Q M +K + + + L++ Sbjct: 182 IVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESIGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDLKQLSERVERAMSETQAEDEDWDPEEMMKGNFTLKDMQKQMEAMDKMGPLDQVLDMIPGFGGGIKDQLPDDAMDVTKDRMRSFEVIMDSMTEEELENPRKVGASRVR--RIAQGSGQDEETIQELLEQHRMMEQTIKQFQNMGDGDMQRMMKKLQN 447
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_HALMA (Signal recognition 54 kDa protein OS=Haloarcula marismortui GN=srp54 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.850e-36 Identity = 85/255 (33.33%), Postives = 146/255 (57.25%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSF---VEKAQEVMQQEDAEEMQ-KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-----KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGV 738 IVDTAGR +++ ++++++ +++ + P LLV+DA GQ A + F IGI G ++TKLDG ++GG AL+ + I +G GE ++D+E F P R+LGMGD+ VE+A E Q+ D E+ + ++ F D KQ +T+ MG + +V+ MIPG+G ++ + ++ ++ + ++++MT EE E P ++ +S R KR+ + SGK E+ V +L+ Q QM +K G+ Sbjct: 182 IVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAIGIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDLKQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPGLGGGLMDQLPDDAMDVTQERMQDFDVIMDSMTEEELENPRVVGQS--RTKRICRGSGKPEERVRELLQQHKQMEQMLKQFQGM 434
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_THEVO (Signal recognition 54 kDa protein OS=Thermoplasma volcanium GN=srp54 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 6.335e-36 Identity = 82/251 (32.67%), Postives = 144/251 (57.37%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEV-MQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVI-----GMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMG 735 I+DT+GR +D +++E++ +K + P +VL+V+DA GQ+A N +G+TG I+TK+DG ++GG ALS PI +G GE M+D+E F P + R+LG+GD+ + E +E + +E+A++ +K+M+ F+ D +R G M +++ +PG KI Q+ AE+ L+ ++++MT +E E PE++ + R R+A+ +G E+ V L+ + M+ MK + G Sbjct: 182 IIDTSGRDSLDSDLIEEIRRIKEAVKPDQVLMVIDATMGQQAGPESKAINDAVGVTGIIITKMDGTAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRLLGLGDLETLFETVKEANITEEEAQKSFEKLMTGKFNLKDMYDVWEKFSRPGLMKKLVDSLPLAKLPGSQKINDDQILTAEQKLQRYRIIMDSMTFQELENPEII--NAKRITRIARGAGVREEDVRMLLKEFKAMKNNMKLMKG 430
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_STAMF (Signal recognition 54 kDa protein OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=srp54 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.081e-35 Identity = 86/245 (35.10%), Postives = 144/245 (58.78%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVR--EAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVDTAGR ++ ++ E++++ + P EV+LV+DA GQ+A L F+ I I+TKLDG ++GG ALS V+G IK +G GE++++LE F P R RILG+GD+ +EK + + + E E+ ++ +S + KQ ++ +MG + +++ MIPG+ P ++ +AE+ +K A+I +MT EE +KPE++ +R R+A +G + V +L+ Q M+ K L Sbjct: 184 IVDTAGRHHREEDLLREMREIAENIKPDEVVLVIDAAIGQQAHDLAKKFHEATPIGSIIVTKLDGTAKGGGALSAVAVTGATIKFIGTGEKIDELEVFRPPRFVARILGIGDLEGLIEKVRRI-KVEFTEKDVEEFLSGRLNMRLVYKQLVSLRKMGPLRKILQMIPGLSLKIPLEIEAGKAEEKIKKWLAIINSMTYEELDKPEIIDRRRIR--RIAYGAGVKPEDVRELLKQYEMMKKLSKQL 425
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_YEAST (Signal recognition particle subunit SRP54 OS=Saccharomyces cerevisiae GN=SRP54 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35 Identity = 92/267 (34.46%), Postives = 139/267 (52.06%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKS--LKIMEAMIEAMTPEEREKP-ELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGS------LPALSNL 774 IVDT+GR ++ + E+ ++ V+ P + ++V+DA GQ A F ILTK+DG +RGG A+S + PI +G GE + DLE F P ++LG+GD+ S E+ Q V +EDA+ + I F DF KQ +T+ +MG +S + MIPGM + QV E E S +K M ++++MT EE E + E P R RVA+ SG + V ++ Q QM RM + G+ +P + N+ Sbjct: 196 IVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGMSNMM-NQVGEEETSQKMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTSVFEVEMILMQQ-QMMARMAQTATQQQPGAPGANARMPGMPNM 460
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_THENV (Signal recognition 54 kDa protein OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=srp54 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 3.144e-35 Identity = 86/245 (35.10%), Postives = 145/245 (59.18%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVDTAGR + ++A++ E+K + ++P EV+LV+DA G+ AA F + I I+TK+D +RGG AL+ +G +K +G GE +++LE F P + R+LGMGD+ + VE+ + V ++ E++ ++I S D F KQ + ++G +S+V M+PG KI+ Q+ ++K+LK A++ +MT EE + PELL S +R R+A +G T + V +++ ++ K L Sbjct: 184 IVDTAGRHRNEEALLQEVKAIYEAVSPDEVVLVIDATVGKLAAAQAEAFMRYLPIHSVIITKMDSTARGGGALAAVAKTGAKVKFIGVGEDVDELEMFIPRKFVARVLGMGDLDALVERIKAVFEE---EQVIQEIESGKLDLLTFKKQIDGLLKLGPLSKVFQMLPGGLAAKISEEQIELSQKNLKKWRAILSSMTVEELKNPELLNASRIR--RIALGAGVTPRDVKEMLTVYENLKRMSKTL 423 The following BLAST results are available for this feature:
BLAST of GO241902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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