GO241902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_HALLT (Signal recognition 54 kDa protein OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=srp54 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 3.144e-35 Identity = 85/256 (33.20%), Postives = 142/256 (55.47%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM---QQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-----KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVME 744 IVDTAGR ++ ++ E+++++R ++P LLV+DA GQ A F IGI G ++TKLDG ++GG AL+ + I +G GE ++D+E F P R+LGMGD+ E+ + M Q+ED + + ++ F D +Q + RMG + +V+ MIPGMG ++ + + ++ E ++++MT EE E+P ++ +S R +R+A+ SG E+ V QL+ Q M + G+ E Sbjct: 182 IVDTAGRHALEDDLIAEIEEIERAVDPDRSLLVLDAAIGQGAKEQARQFEKSIGIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDLKQLSERVERAMAEAQEEDEDWDPEDMLQGEFTLKDMKRQMDAMNRMGPLDQVMDMIPGMGGGMMDQLPDDAMDVTQDRMRRFERIMDSMTDEELEQPRVVGQS--RTERIARGSGTDEETVRQLLEQHSMMEQTISQFQGMGE 435
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_METS5 (Signal recognition 54 kDa protein OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=srp54 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 5.363e-35 Identity = 84/250 (33.60%), Postives = 144/250 (57.60%), Query Frame = 1 Query: 1 IVDTAGRLQIDKA--MMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS--ANFDFNDFLKQTRTVARMGSMSRVIGMIPG---MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVDTAGR + +++E+KD+ + P EV+LV+DA GQ+A L F+ + I+TK+DG ++GG ALS +G PIK +G GE++++LE F P R RILGMGD+ + +EK + + E ++ ++M+ + D KQ V +MG +S+++ +IPG MG I QV+ E+ ++ +++ +MT +E + P ++ + R +R+A SG + V +L+ ++ +K L Sbjct: 183 IVDTAGRHGYGEEVKLLEEMKDIYEKIKPNEVILVIDASLGQKAYDLAKRFHEASNVGSIIITKMDGTAKGGGALSAVAATGAPIKFIGVGEKIDELEVFNPRRFVARILGMGDLEAIIEKMKAMEDYEGIQKKMGEVMTGKSKLTLRDMYKQIVAVRKMGPLSKILQLIPGMNMMGDIPEDQVKVGEQKMQRWLSIMNSMTYQELDNPSIIDKQ--RMRRIAMGSGTEVEEVRELIEHFNTVQRTLKML 430
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_ARCFU (Signal recognition 54 kDa protein OS=Archaeoglobus fulgidus GN=srp54 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 5.363e-35 Identity = 87/255 (34.12%), Postives = 139/255 (54.51%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP-GMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLP 759 I+DTAGR ++ ++DE+ + V P LLV+DA GQ A+ F+ IGI G I+TK DG ++GG ALS G PI +G GE++ED E F P R+LGMGD+ + +EK + + +E+ + + + F D KQ + +MG + ++ M+P G+G K+ + ++ +K ++++MT EE P+++ S +R R+A SG + Q V +L+ MKNLM M+ LP Sbjct: 178 IIDTAGRHALEDELIDEMIKIAEVARPDYKLLVLDAAIGQLASKQAQAFHEAIGINGIIITKFDGTAKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALMEKIERIASEEELD--PEAFLKGTFTLKDIYKQIEAMNKMGPVRKIFEMLPFGLGLKVDNDVMEMTQEKMKKFRVIMDSMTEEELLNPKIIDSSRIR--RIAIGSGTSPQEVKELL----NYYKTMKNLMKKMKKNKLP 424
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_NATPD (Signal recognition 54 kDa protein OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=srp54 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 7.004e-35 Identity = 84/253 (33.20%), Postives = 140/253 (55.34%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEE--MQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-----AEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGV 738 IVDTAGR +++A++DEL+ ++ ++P LLV+DA GQ A F+ +GI G +TKLDG ++GG AL+ + + I +G GE ++D+E F P R+LGMGD+ E+ + M++ AEE + +M F D Q + +MG + +V+ MIPG+G Q+ + ++ L+ E ++++M+ E E P + +S + +R+A+ SG E V +L+ Q M MK G+ Sbjct: 182 IVDTAGRHALEEALIDELEAIESAVDPDRNLLVLDAAIGQGAKDQAERFHDAVGIDGVAITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVKDIERFEPSGFISRLLGMGDLKQLSERVERAMEETQAEEDWDPEDLMKGEFTLKDMRNQMNAMNKMGPLDQVMDMIPGLGGGIKDQLPDDAMDMTQERLRDFEVIMDSMSEAELENPRAIGQSQI--ERIARGSGTDEDTVRELLEQHKMMSRMMKQFQGM 432
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_GEOCY (Signal recognition particle 54 kDa protein OS=Geodia cydonium GN=SRP54 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 7.004e-35 Identity = 89/308 (28.90%), Postives = 162/308 (52.60%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMIEAMTPEEREKP---ELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRV---RMKNLMGVMESGSLPALSNLEDALKSDRRLLLVPLGGRKDQNQGGSS-----LTRHQQGKSS 885 IVDT+GR + ++++ +E+ V + ++P ++ V+D GQ + F ++ + I+TKLDG ++GG ALS + PI +G GE ++++EPF ++LGMGD+ +EK ++ E+ EE+ K+ F D +Q + + +MG +++IGMIPG ++ RE+ LK + M+++M E + P +L ++ P R RVA+ SG + + V++L+ Q +M + G+ + G L N K ++++ + + R Q GG S + + QQG S+ Sbjct: 187 IVDTSGRHKQEESLFEEMLQVSQAIDPDNIIFVMDGTIGQACESQARAFKEKVDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDEMEPFKTKPFVSKLLGMGDLEGLMEKVSDLKLDEN-EELMDKLKHGQFTLRDMYEQFQNIMKMGPFNQIIGMIPGFSPDFMSKGNERESMAKLKRLMTMMDSMNDGELDHPNGAKLFSKQPGRAARVARGSGTSVREVNELLKQYSNFSATVKKMGGIKGLFKGGDLGKNVNPSQMAKLNQQMAKM-MDPRVLQQMGGMSGLQNMMRQFQQGASN 492
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_AERPE (Signal recognition 54 kDa protein OS=Aeropyrum pernix GN=srp54 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 9.148e-35 Identity = 84/248 (33.87%), Postives = 139/248 (56.05%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG---MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 IVDTAGR + ++DE+K + + P EV LV+DA GQ+A L F+ I I+TK+DG +RGG AL+ V+G IK +G GE + +LEPF P R RILGMGD+ S +E+ + + + + + + ++ +Q R + ++G + +V+ M+PG + I ++ E+ +K A+IE+MT EE ++PE++ + R +R+A SG + V +L+ ++ MK L Sbjct: 182 IVDTAGRHGHGEEARLLDEMKAIASKVRPDEVALVIDASIGQKAMGLAERFHKSTPIGSIIVTKMDGTARGGGALTAAAVTGARIKFIGTGETLGELEPFAPRRFVARILGMGDLESLLERIKSLEEAGELDRAAEDVLKGRITMRTIYRQLRAMRKLGPLGKVLQMLPGASMLASIDEGALKLGEEKMKRWMAIIESMTYEELDRPEIIDKR--RMRRIAIGSGTSVDDVRELLVYYKNLKTMMKKL 427
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_HALSA (Signal recognition 54 kDa protein OS=Halobacterium salinarium GN=srp54 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.038e-34 Identity = 85/267 (31.84%), Postives = 144/267 (53.93%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSF---VEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-----KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPALSNLE 777 IVDTAGR ++ ++ E+++++ V+ P LLV+DA GQ A F+ IGI G +TKLDG ++GG +L+ + I +G GE ++D+E F PD R+LGMGD+ VE+A E Q +D + + +M F +D KQ + + MG + +V+ MIPGMG ++ + ++ ++ E ++++MT E P + S +R R+A+ SG+ E V +L+ Q M M+ G+ + +S ++ Sbjct: 182 IVDTAGRHALEDDLIAEIEEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDASIGIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRLLGMGDLKQLTERVERAMEETQDDDEDWDPEDLMKGEFTLHDMRKQMQAMDNMGPLDQVMDMIPGMGGGLMDELPDDAMDVTQERMRGFEVIMDSMTEAEMADPRSVGASQIR--RIARGSGQPEDRVRELLDQHKMMAQTMQQFQGMGDGDMQRMMSKMQ 446
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_HALS3 (Signal recognition 54 kDa protein OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=srp54 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.038e-34 Identity = 85/267 (31.84%), Postives = 144/267 (53.93%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSF---VEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-----KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPALSNLE 777 IVDTAGR ++ ++ E+++++ V+ P LLV+DA GQ A F+ IGI G +TKLDG ++GG +L+ + I +G GE ++D+E F PD R+LGMGD+ VE+A E Q +D + + +M F +D KQ + + MG + +V+ MIPGMG ++ + ++ ++ E ++++MT E P + S +R R+A+ SG+ E V +L+ Q M M+ G+ + +S ++ Sbjct: 182 IVDTAGRHALEDDLIAEIEEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDASIGIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRLLGMGDLKQLTERVERAMEETQDDDEDWDPEDLMKGEFTLHDMRKQMQAMDNMGPLDQVMDMIPGMGGGLMDELPDDAMDVTQERMRGFEVIMDSMTEAEMADPRSVGASQIR--RIARGSGQPEDRVRELLDQHKMMAQTMQQFQGMGDGDMQRMMSKMQ 446
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_ACIAM (Signal recognition 54 kDa protein (Fragment) OS=Acidianus ambivalens GN=srp54 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 2.662e-34 Identity = 89/252 (35.32%), Postives = 146/252 (57.94%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM-----SANFDFNDFLKQTRTVARMGSMSRVIGMIPG---MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVA--QLFQMRVRM 720 IVDTAGR + A+++E+K++ + P EV LV+DA GQ+A L + FN I I+TK+DG ++GG ALS +G IK +G GE++++LE F P R RILGMGD+ + +EK +EV E+ ++MQKK+ D Q + +MG +S++ ++PG +G+I Q++ E+ ++ A++ +MT EE + P ++ +S R +R+A SG + V +L+ L Q ++M Sbjct: 185 IVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARILGMGDIETILEKIKEV---ENYDKMQKKMEEVISGKGKLTLRDVYNQLIALRKMGPLSKLFQLLPGIGMLGQIPEDQLKVGEEKMRKWLAIMNSMTYEELDNPSIIDKS--RMRRIALGSGTEIEDVKELIEHYNLMQRTIKM 431
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_PYRIL (Signal recognition 54 kDa protein OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=srp54 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.540e-34 Identity = 83/245 (33.88%), Postives = 145/245 (59.18%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 I+DTAGR + ++A++ E+K + +NP EV+LV+DA G+ AA F + I I+TK+D +RGG AL+ +G +K +G GE +++ + F P + R+LGMGD+ + VEK + V ++ E++ ++I S D F KQ + ++G +S+V+ ++PG KI+ QV ++K+LK A++ +MT EE + P++L S +R R+A +G T + V +++ ++ K L Sbjct: 184 IIDTAGRHKNEEALLQEVKMIYEAVNPDEVILVIDATVGKLAAAQAEAFMKYLPIHSVIITKMDSTARGGGALAAVIKTGARVKFIGVGEDVDEFDLFNPRKFVARVLGMGDLDALVEKIKAVFEE---EKVLQEIESGRLDLLTFKKQIEGLLKLGPLSKVLQLLPGGFAAKISEEQVELSQKNLKKWYAILSSMTIEELKNPDILNASRIR--RIALGAGVTPKDVKEMLTVYENLKKMSKTL 423 The following BLAST results are available for this feature:
BLAST of GO241902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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