GO241902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_BOVIN (Signal recognition particle 54 kDa protein OS=Bos taurus GN=SRP54 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.843e-33 Identity = 77/260 (29.62%), Postives = 142/260 (54.62%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMIEAMTPEEREKPE---LLAESPVRRKRVAQDSGKTEQHVSQLVAQ---LFQMRVRMKNLMGVMESGSL 756 IVDT+GR + + ++ +E+ V + P ++ V+DA GQ F ++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LGMGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG G ++ +E+ LK + ++++M +E + + + ++ P R +RVA+ SG + + V +L+ Q QM +M + G+ + G + Sbjct: 188 IVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM 446
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SULIY (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=srp54 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.118e-32 Identity = 83/249 (33.33%), Postives = 140/249 (56.22%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM--SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMK 723 IVDTAGR + +++E+K++ L P +V+LV+DA GQ+A L + F+ I I+TK+DG ++GG ALS +G IK +G GE++++LE F R RILGMGD+ S +EK + + + E ++ + +M D Q + +MG +S+V+ IPG+G + P Q++ E+ ++ A + +MT +E E P ++ +S R +R+A+ SG + V +L+ M +K Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILEKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGVMLPTPSEDQLKLGEEKIRRWLAALNSMTYKELENPSIIDKS--RMRRIAEGSGLEVEDVRELLEWYNNMNKLLK 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SULIN (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=srp54 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.118e-32 Identity = 83/249 (33.33%), Postives = 140/249 (56.22%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM--SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMK 723 IVDTAGR + +++E+K++ L P +V+LV+DA GQ+A L + F+ I I+TK+DG ++GG ALS +G IK +G GE++++LE F R RILGMGD+ S +EK + + + E ++ + +M D Q + +MG +S+V+ IPG+G + P Q++ E+ ++ A + +MT +E E P ++ +S R +R+A+ SG + V +L+ M +K Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILEKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGVMLPTPSEDQLKLGEEKIRRWLAALNSMTYKELENPSIIDKS--RMRRIAEGSGLEVEDVRELLEWYNNMNKLLK 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SULIM (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=srp54 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.118e-32 Identity = 83/249 (33.33%), Postives = 140/249 (56.22%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM--SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMK 723 IVDTAGR + +++E+K++ L P +V+LV+DA GQ+A L + F+ I I+TK+DG ++GG ALS +G IK +G GE++++LE F R RILGMGD+ S +EK + + + E ++ + +M D Q + +MG +S+V+ IPG+G + P Q++ E+ ++ A + +MT +E E P ++ +S R +R+A+ SG + V +L+ M +K Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILEKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGVMLPTPSEDQLKLGEEKIRRWLAALNSMTYKELENPSIIDKS--RMRRIAEGSGLEVEDVRELLEWYNNMNKLLK 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SULIL (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=srp54 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.118e-32 Identity = 83/249 (33.33%), Postives = 140/249 (56.22%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM--SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMK 723 IVDTAGR + +++E+K++ L P +V+LV+DA GQ+A L + F+ I I+TK+DG ++GG ALS +G IK +G GE++++LE F R RILGMGD+ S +EK + + + E ++ + +M D Q + +MG +S+V+ IPG+G + P Q++ E+ ++ A + +MT +E E P ++ +S R +R+A+ SG + V +L+ M +K Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILEKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGVMLPTPSEDQLKLGEEKIRRWLAALNSMTYKELENPSIIDKS--RMRRIAEGSGLEVEDVRELLEWYNNMNKLLK 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SULIK (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=srp54 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.118e-32 Identity = 83/249 (33.33%), Postives = 140/249 (56.22%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM--SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMK 723 IVDTAGR + +++E+K++ L P +V+LV+DA GQ+A L + F+ I I+TK+DG ++GG ALS +G IK +G GE++++LE F R RILGMGD+ S +EK + + + E ++ + +M D Q + +MG +S+V+ IPG+G + P Q++ E+ ++ A + +MT +E E P ++ +S R +R+A+ SG + V +L+ M +K Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILEKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGVMLPTPSEDQLKLGEEKIRRWLAALNSMTYKELENPSIIDKS--RMRRIAEGSGLEVEDVRELLEWYNNMNKLLK 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SULIA (Signal recognition 54 kDa protein OS=Sulfolobus islandicus (strain M.16.27) GN=srp54 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.118e-32 Identity = 83/249 (33.33%), Postives = 140/249 (56.22%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM--SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMK 723 IVDTAGR + +++E+K++ L P +V+LV+DA GQ+A L + F+ I I+TK+DG ++GG ALS +G IK +G GE++++LE F R RILGMGD+ S +EK + + + E ++ + +M D Q + +MG +S+V+ IPG+G + P Q++ E+ ++ A + +MT +E E P ++ +S R +R+A+ SG + V +L+ M +K Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILEKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGVMLPTPSEDQLKLGEEKIRRWLAALNSMTYKELENPSIIDKS--RMRRIAEGSGLEVEDVRELLEWYNNMNKLLK 429
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SULSO (Signal recognition 54 kDa protein OS=Sulfolobus solfataricus GN=srp54 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.491e-32 Identity = 81/238 (34.03%), Postives = 138/238 (57.98%), Query Frame = 1 Query: 1 IVDTAGRLQI--DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM--SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLV 690 IVDTAGR + +++E+K++ VL P +V+LV+DA GQ+A L + F+ I I+TK+DG ++GG ALS +G IK +G GE++++LE F R RILGMGD+ S +EK + + + + ++ + +M D Q + +MG +S+V+ IPG+G + P Q++ E+ ++ A + +MT +E E P ++ +S R +R+A+ SG + V +L+ Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILEKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGIMLPTPSEDQLKIGEEKIRRWLAALNSMTYKELENPNIIDKS--RMRRIAEGSGLEVEEVRELL 418
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_PYRCJ (Signal recognition 54 kDa protein OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=srp54 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.615e-31 Identity = 78/245 (31.84%), Postives = 142/245 (57.96%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 I+DTAGR + ++ ++ E+K + + P EV LV+DA G+ AA F + I I+TK+D +RGG AL+ +G +K +G GE +++ E F P + R+LGMGD+ + VEK + V ++ +++ +++ S D F KQ ++ ++G +S+V ++P K++ Q+ ++K+L+ +A++ +MT EE + PE+L S +R R+A +G T + V +++ M+ K L Sbjct: 183 IIDTAGRHRNEEELLKEVKAIYDAVKPDEVFLVIDATVGKLAAAQAEAFMKYLPIHSVIITKMDSTARGGGALAAVAKTGARVKFIGVGEDVDEFELFNPRKFVARVLGMGDLDALVEKIKAVFEE---DKVLEELESGRLDLLTFKKQIDSLLKLGPLSKVFQLLPSNFAIKVSEEQIELSQKNLRKWKAILSSMTMEELKHPEVLNASRIR--RIAMGAGVTPKDVKEMLTVFENMKKMSKML 422
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SR543_ARATH (Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana GN=SRP-54C PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 6.136e-31 Identity = 84/285 (29.47%), Postives = 150/285 (52.63%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEERE--KPELLAESPVRRKRVAQDSGKTEQHVSQLVAQ---LFQMRVRMKNLMGVMESGSLPALSNLEDALKSDRRL---LLVPLGG 825 IVDT+GR + + ++ +E++ V P V+ V+D+ GQ A F + + I+TK+DG ++GG ALS + P+ +G GE M++ E F R+LGMGD FV+K QEV+ ++ E+ +K+ NF Q + + MG + V M+PG+ + +E++ +K M+++MT +E + P++ ES R R+A+ SG+ + V +++ + L ++ +MK L + ++G + ALS +A + L +L +GG Sbjct: 188 IVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNES--RMMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGG 469 The following BLAST results are available for this feature:
BLAST of GO241902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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